| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0954 |
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| Symbol | |
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| ID | 4957731 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 1009677 |
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| End bp | 1011026 |
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| Gene Length | 1350 bp |
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| Protein Length | 449 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640180124 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001112314 |
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| Protein GI | 134298818 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGGGTTTT TAACCAAAAA ACAAGAACAA ATCACAGAAA TCAATGTAGG TCTGGTATCC
TACGAAAAAG CAAAGGATTT GATAAGACAA TTTATTGCTA CTCCTGAACA CTATGAAAAT
GATAACGAAA AAGCAAAGGT AAAAAAACTA GAACTTGAAA GTATGAAGGG TGAAAAGAAG
GCTAAACAAG AGTTAATTGA CTACCTGGTT GAAACAATGA TCAGATATAA GTTTGAAATT
GAGGGGATGA TTCTTCATGA AGCTGCTATA GAGATATACA AAGAGACCTG GGGGTTGGGA
ATCATAGAGG ATATTTATCA TGACCCTGAA GTTGATGAGG TTGAAGTAAA TGGTATTCAT
AATATATACT CCATCCGCAG AGGCAGGTAC TGCAGAGAAA ACGTAATTTT TAATTCAGAA
CAAGAGCTAA TGGCCTTGAT GGGTAGAATA TTTGTCGACT ACTGTGCTGT TAACGAAGGC
AACCCTGTTG GAAGAACTGT TCGGGTAGAT GGGACCAGAG TATTAGCCAC TGTTCCCCCT
TTTACCAATA CAATCACCCT TACAATGAGA AAGCACAATA CATTTATTTA CTCAAAGGAT
ACCTTGACCC AGGTTGGAAC TTTAGATCCC AGAATATATG ATGCCCTAGC CCTATTTAAC
AGGGGATTAC TAAATATTCT TTATTCCGGC CCCACCAATG GTGGCAAAAC CACTATGTTG
AGACATTTTT TTAGATATAG TCCTCCCGAT ATCAGGACCG TACTGTTAGA ACCAAGACAT
GAGCTAAAGC TACAAGAAAA CTACCCCGAA TGGAATATTA TTGAGTTTCA GGAACTCCCC
CAGCAACGAT TAACTCTATT GCAAGCCTTT GAAACAGCAC TGCAAGTAAC TCCGGTAAGG
ATCATAACCG GTGAGATCCT GGGTGGTAGG GAAGGCCCAG AGGCAATTAA ATCAGGAAAC
CGGGGGCATA CAGGAAATCT ATCAACTATC CACGCAGAGA CAGTAGAAGA CGCCATTTTA
GAACTGACCA ACATTCTTGT GGAAGAAGGT AGATCCCAAA GTATTACGAA GGAACAAGCC
ATGGAAAGGG TATGTAGGGC ATTTGATGTA ATTGTCCAGA TATTCGTCCC ACCTCAATCA
GGAGTAAAAA AAGTGGTCGC TGTTGGAGAA CCAAAATTTG TTGATGGAAC TGTAAAAGTT
ATTAACTATT TTGAATGGCA GCCATCTGAG GAAGATTTCC TAAAGGGTTA CTGGCAATAC
CCTAATCCTT TATCAGAAAG ATTAATTAAA AAGCTGCATC GAAATGGTGT TCCAGCGGAG
GAATTAAAAA GGGTGGGGCT TATATGGTAG
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| Protein sequence | MGFLTKKQEQ ITEINVGLVS YEKAKDLIRQ FIATPEHYEN DNEKAKVKKL ELESMKGEKK
AKQELIDYLV ETMIRYKFEI EGMILHEAAI EIYKETWGLG IIEDIYHDPE VDEVEVNGIH
NIYSIRRGRY CRENVIFNSE QELMALMGRI FVDYCAVNEG NPVGRTVRVD GTRVLATVPP
FTNTITLTMR KHNTFIYSKD TLTQVGTLDP RIYDALALFN RGLLNILYSG PTNGGKTTML
RHFFRYSPPD IRTVLLEPRH ELKLQENYPE WNIIEFQELP QQRLTLLQAF ETALQVTPVR
IITGEILGGR EGPEAIKSGN RGHTGNLSTI HAETVEDAIL ELTNILVEEG RSQSITKEQA
MERVCRAFDV IVQIFVPPQS GVKKVVAVGE PKFVDGTVKV INYFEWQPSE EDFLKGYWQY
PNPLSERLIK KLHRNGVPAE ELKRVGLIW
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