| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0900 |
|---|
| Symbol | |
|---|
| ID | 4956274 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 959940 |
|---|
| End bp | 960956 |
|---|
| Gene Length | 1017 bp |
|---|
| Protein Length | 338 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 640180071 |
|---|
| Product | aminodeoxychorismate lyase |
|---|
| Protein accession | YP_001112261 |
|---|
| Protein GI | 134298765 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG1559] Predicted periplasmic solute-binding protein |
|---|
| TIGRFAM ID | [TIGR00247] conserved hypothetical protein, YceG family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 21 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGGTAAAGA AATGGCGTGC AAAAAAACGT TTTTATTTAT TTGGTGTTGT GATACTAGTT
AGTGTACTTT TTTATGCTAC TGGCACTTTA GATCCGGTTG ACTCATCTGG GAAATCGTCC
GACATACTGG TACAGATCTC TCCTAATACC TCCACAGGAC AGATCTCTGA TATGCTTAAA
CAACAAGGAC TGATTCAAAA TGCCGGGGTT TTTAAACTTT ATACCCGTTA TCATAAACTA
GATAACCAAA TCAAAGCAGG TTATTACTTA CTTAATCCTT CTATGTCCGT GGACGAAATC
TTACATTTAC TGGTACGTGG TAAGACTGCT TCGAAAAGTT TTACCATTCC GGAAGGTTAT
ACTTTGGCAC GTATTACAGA TAGTTTGGCC AATAAAGGAT ATATCCAAGA GCAACTGTTT
AAAGACTTAT TAACTAGTGG TAAATTTAAC TACCCATTTA TGAAGGACTT ACCCTCTGGG
GAAAATAGAT TGGAGGGTTA TTTGTTTCCG GAAACCTATA ACGTAAGTCT GGACAGTGCC
GAGAAGGATA TTATAAATGT CATGCTGGCT GGTATGGATC GGCAGATTAA AGAGCTTAAG
TTAGAAGAAA AGGCTAGAAA GATGAACCTG ACATTACATC AGGCTATCAC CATTGCTTCT
ATGATTGAGC GAGAAGCAAA GGTTCAGAAG GATCGTGCAT TAATTTCCAG CGTTATTCAT
AACCGCCTAA AAATTGGCAT GAGACTCCAA ATTGATGCTA CGGTGGAGTA TGCCTTGGGG
GGGCACCGAG AGAAAATATA TTATAAGGAT CTGGAAGTAA ATTCACCCTA TAATACCTAT
AAAAACCCCG GATTACCACC GGGCCCCATT GCCTCCCCGG GTAAGGAATC ACTATTGGCG
GCGGTCACGC CGGCCAAAAC AAAATATCTT TATTATGTTG CCAAACCAGA TGGGTCCCAT
GCCTTTGCAG AAACCCTGGA GGAACACAAT ATATATAAGC AAAGATACTT AAAATAG
|
|---|
| Protein sequence | MVKKWRAKKR FYLFGVVILV SVLFYATGTL DPVDSSGKSS DILVQISPNT STGQISDMLK
QQGLIQNAGV FKLYTRYHKL DNQIKAGYYL LNPSMSVDEI LHLLVRGKTA SKSFTIPEGY
TLARITDSLA NKGYIQEQLF KDLLTSGKFN YPFMKDLPSG ENRLEGYLFP ETYNVSLDSA
EKDIINVMLA GMDRQIKELK LEEKARKMNL TLHQAITIAS MIEREAKVQK DRALISSVIH
NRLKIGMRLQ IDATVEYALG GHREKIYYKD LEVNSPYNTY KNPGLPPGPI ASPGKESLLA
AVTPAKTKYL YYVAKPDGSH AFAETLEEHN IYKQRYLK
|
|---|
| |