Gene Dred_0885 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0885 
Symbol 
ID4958583 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp945674 
End bp946330 
Gene Length657 bp 
Protein Length218 aa 
Translation table11 
GC content39% 
IMG OID640180057 
ProductXRE family transcriptional regulator 
Protein accessionYP_001112247 
Protein GI134298751 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones28 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAG GTAGTAGAAT AAAAAAATTG AGAACATATC AGGGCTTAAG TATGAATGAG 
TTATCCAGAC GTTCCGGAGT TGCTCAATCA CATTTAAGCT ATGTAGAAAG TGGCCAACGT 
CAACCCACTT TCGATGTAAT TGAACGTATT TGCAGTGGAC TTGGGTTGTC GGTAGCAGAA 
TTTTTTAACG AAGGTTTTAT GCCAAGTCCC TATTCTAGCG ACATAAACAG TCTTGTTAAT 
GAAGTTCAAA ACCTAAAGCC GTCTCAGGTT TCACTGATTA AAAATATTGC TACTGAATTC 
TCATTAACTA ATGAAGAACT TGAATTGGCA GCCAAAAAAT CGTTATCAAC TATTGCCAAT 
AGAGAATCTG CTTCTGGAGT TTTACATATC GACCTCTTAG ACGTATTTGG CAGAAAAGAC 
ACCGTCCTAT CCGCAGCCGG TGTCCCCCTT TCGTTGGAGG ATAGGATTGA GATATTAGAA 
TTAATTAAAG AAAAGCTACC GGCTGATGAG GACCTAGATT ACGAAAATAA TGAGGTTATA 
GCAGCCAGCT ACCAGGGCAA CCGGTTCGCT CACATCCCCA CCCAAGAAGA AGTGGAGGAT 
ATTGAGCTTG CATTTAAGCT TGCTGAACAA CAAAAAAATA GGAAACACAA GAAATAA
 
Protein sequence
MDIGSRIKKL RTYQGLSMNE LSRRSGVAQS HLSYVESGQR QPTFDVIERI CSGLGLSVAE 
FFNEGFMPSP YSSDINSLVN EVQNLKPSQV SLIKNIATEF SLTNEELELA AKKSLSTIAN 
RESASGVLHI DLLDVFGRKD TVLSAAGVPL SLEDRIEILE LIKEKLPADE DLDYENNEVI 
AASYQGNRFA HIPTQEEVED IELAFKLAEQ QKNRKHKK