Gene Dred_0878 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0878 
Symbol 
ID4956459 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp938628 
End bp939518 
Gene Length891 bp 
Protein Length296 aa 
Translation table11 
GC content36% 
IMG OID640180050 
ProductD12 class N6 adenine-specific DNA methyltransferase 
Protein accessionYP_001112240 
Protein GI134298744 
COG category[L] Replication, recombination and repair 
COG ID[COG0338] Site-specific DNA methylase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0291145 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCCAGTTC AAAATGCTAA ACTCAGCCCA TTACGTTACC CAGGAAGTAA AGCTATACTA 
ACGAACTATA TCAGCAGCGT GCTTGAAGAA AATTACTTGA CTGATTGTAC AATCGTAGAG
CCCTATGCAG GGAGTGCTGT TGTGTCTTTA GCGTTGCTAG AATCGCTTGT AGCTGAAAAA
GCAATTCTCG TAGAGCGTGA TCCGTTAGTT TACTCATTTT GGCAATCAGT CTTTAACCAT
ACTTATTTAT TAATAGAAAA GATTTATAAT CTGCCAATAA CTATTGATAC TTGGAATGCC
TTTCAGATAT ACCGAAAATG TGATAACATT TCATCTCATA CAGTAGTAGA TTTAGGACTG
GCTGGACTAT TCTATAATAG AACTAATTTT TCTGGCATTC TAAAAGCAGG GCCACTTGGC
GGGCATAATC AATCTTCTCA GTATAAGATT GATTGCAGAT TCAATAAACA CAATATTATT
TCACAAATCG AGAGGCTTTC AAAGTTTAAA AATAGAGTTG AAGTATTCTT TGGTGACGCA
ATGGAATTTC TCAAGCAAAA CAAAAAAAAC TTTTTAAAAG GCAATTTCTT TTTATACGCA
GATCCCCCTT ACTATCTTAA AGGTAAAAGC TTATATCGCT ATTGGTATGA GCACAAAGAA
CATAAAGCAC TAGCAAAATT CCTACTTTCA AGTAACTGCA ATTGGCTAGT AAGTTATGAC
GATCATGCAG AGATACGCAA GATGTATTCT AATGAGATTA GCTTGATCCC TGTATATTTT
GATTATTCAT TGACTAGCCC CAGACGGGAA AGAGAGCTAC TTATATCAAA TTTAGCATTA
CCACCAATAG CTTTTTGCCA TGAGAACCTA CAGCCAATAA CTACGGCATA A
 
Protein sequence
MPVQNAKLSP LRYPGSKAIL TNYISSVLEE NYLTDCTIVE PYAGSAVVSL ALLESLVAEK 
AILVERDPLV YSFWQSVFNH TYLLIEKIYN LPITIDTWNA FQIYRKCDNI SSHTVVDLGL
AGLFYNRTNF SGILKAGPLG GHNQSSQYKI DCRFNKHNII SQIERLSKFK NRVEVFFGDA
MEFLKQNKKN FLKGNFFLYA DPPYYLKGKS LYRYWYEHKE HKALAKFLLS SNCNWLVSYD
DHAEIRKMYS NEISLIPVYF DYSLTSPRRE RELLISNLAL PPIAFCHENL QPITTA