| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0843 |
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| Symbol | |
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| ID | 4958081 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 899175 |
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| End bp | 901223 |
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| Gene Length | 2049 bp |
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| Protein Length | 682 aa |
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| Translation table | 11 |
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| GC content | 45% |
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| IMG OID | 640180016 |
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| Product | TRAG family protein |
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| Protein accession | YP_001112206 |
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| Protein GI | 134298710 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG3505] Type IV secretory pathway, VirD4 components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGATTGGT TAAAAAAGGG TAATGCTGCG ATGTATTTAG TATTGGCAGT GGTTTTCGGG
GCCCTTGTTT TAATTTTCCC GGTGCTGGCA CTGGTATTTC TCTGCATGAT GGTTGCTTGG
TGGGCTGGTG GGAAAGTTCT CTATACACCA GCTATTGTTT TTGTTACTGC AATTAGCCTA
GGTTTAACAG CTGGATATGG GATGAAGTGT GTGCAGCAAG TACCGAGGTT TGATATGAGT
TCTGGTGAAT GGGTAAAATC GGATGTCCAG GCTCTATCAA TTAGGTCATG GTTTTCTGCA
AAGGAACTAT CAAACCCGGG CAACCGAGCA GGGCGCACTG GAGTTCTTTT AGGAAGTTTG
GGTGGACTGG GGGTTGCGGT AGCATTTAAG AGACGAGGGA AAAAACGGTT GCATGGACCG
GGGATAGTCC AAGGGCGTCC GGTGGTCAAG GGTGGTTGGG GTGACGAAAA AGAAGCTGCT
AAGATATGCG AATTTGGTCC CCCGAAGCCC GGGAAGTACG GCGGAGGTGT TGTCTTAGGA
AAGTTAAACG GCCGCATTTT ACGGGTGATT ATTGGCCGCA TGGCAATTGC AGCTCACACC
GCCATTTTTG GAGCCACGGG TGCAGGTAAA ACCTTTGGGT GGGTTTTGCC CAACATTGTA
TCAACAGCCC ATGATGGTTG GTCTATGGTA ATTTCAGATC CCAAGGGCGA ACTCGTAGCC
GGCAAGTGGA ATGCCAGTGG AGAATATGAG CCGGGAATTG CTGATTGGCT GAAGAAGCAG
GGCTACGAGA TTATAATTTT AAACTTTAAA GATCCCAGTC AGGGTAGCCA CCGGTGGAAT
CCGTTGTTCG AGGCCAAGGA TGATGCGGAA TTCCGGCAAG TTTGCGAAGC CATGATTCTC
AGTGCAGGAA AGGAAAACCC GTTTTTTGCT GGTGGTGAAT CAAACCTTTT TACGGCATTG
ATGGGATTAA CCCGATATGG AAGTTTTCTT AAAGACGAAA TGAGGCATAT GAGAACCGTG
CTTTCTTTAT TGTCCTGGCC AGTGGAAAAG TTGGATGAAA CTTTTGAGAA GGAGTATCGC
TCAGGCCAGA TACCAGTCTA TTTTTATGAA AAATGGCGTG CAGCTGCTGG AATGTTTAAC
AACTTTGCCA CCGGGGTGCA AAGTAAGGTG GCTGTTATGA CGGACGGTCC TCTGGCAGCC
TTAACGGCCG GTCATGATAT CAATCTGTTG GCTTTGTCAA AGAAAAAAAC AGCGTTGTTC
TGTATCTTGC CAACTATCGG AGATCTAAAG CCTTTGCTTA CTGCTTTTTA TTACTTGCTT
TTTAAACGGT TGGTTGAATA CGCAGAGGCC AATAACAATC GGCTGCCAAT ACCAGTTCGG
TTTATCCTAG ATGAGTTTGC TAACATTGGT AGAATTCCTA ATTTTTCAAA CCGTATATCT
TTTGATCGAG GACTTGGGAT TTGCTACAAC TACATTATTC AAAACCGTAC CCAGTTAAAT
AGCCTATATG GATCTGATGT TGCAGAAACG TTTTTGGGTA ACACAGATAT TCGGATGGCT
TTAAGGGTTA ACGACGATAA AACCGCCGGT TATTTTACAC GACAGCTTGG CAGTGCAGAC
GTTTGGGATA TCTCTGAGAG AAAGGACGTA ACATGGCCAT GGAAGCGCAT GGAAATTACC
AAAAAAACGG AAAGTAAGAA AAAATTGGAC TTGTTATATC CTTGGCAATT CTATGAGATG
GAATTCTATA CAGCTGTGGT TAGGGTACCG ACTTGTCGCC CATTTTATTT AGACACGGTG
GCTTTTTCAG ATTTAAAAGA GTTTAAGGAG CTGTCACGGG AACCAAAAAC AATTACAGAT
TTTGCACCAG CGGTACCTAA TCATGTGCCG ACACCTGCCA TTCCGAGCGC TGAAGAAGAG
GATGAAGCAC CAACACCCCC TAAGCGACAG AGAAAAAGAA AGGAAAGCCA TCCGGATCCT
GCACCGGACG TAGCCAGCGT ATTAGAGTTA AACAAAGGGG ACGACGATAT TATGAGAATG
TTTGGCTAG
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| Protein sequence | MDWLKKGNAA MYLVLAVVFG ALVLIFPVLA LVFLCMMVAW WAGGKVLYTP AIVFVTAISL
GLTAGYGMKC VQQVPRFDMS SGEWVKSDVQ ALSIRSWFSA KELSNPGNRA GRTGVLLGSL
GGLGVAVAFK RRGKKRLHGP GIVQGRPVVK GGWGDEKEAA KICEFGPPKP GKYGGGVVLG
KLNGRILRVI IGRMAIAAHT AIFGATGAGK TFGWVLPNIV STAHDGWSMV ISDPKGELVA
GKWNASGEYE PGIADWLKKQ GYEIIILNFK DPSQGSHRWN PLFEAKDDAE FRQVCEAMIL
SAGKENPFFA GGESNLFTAL MGLTRYGSFL KDEMRHMRTV LSLLSWPVEK LDETFEKEYR
SGQIPVYFYE KWRAAAGMFN NFATGVQSKV AVMTDGPLAA LTAGHDINLL ALSKKKTALF
CILPTIGDLK PLLTAFYYLL FKRLVEYAEA NNNRLPIPVR FILDEFANIG RIPNFSNRIS
FDRGLGICYN YIIQNRTQLN SLYGSDVAET FLGNTDIRMA LRVNDDKTAG YFTRQLGSAD
VWDISERKDV TWPWKRMEIT KKTESKKKLD LLYPWQFYEM EFYTAVVRVP TCRPFYLDTV
AFSDLKEFKE LSREPKTITD FAPAVPNHVP TPAIPSAEEE DEAPTPPKRQ RKRKESHPDP
APDVASVLEL NKGDDDIMRM FG
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