| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0825 |
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| Symbol | |
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| ID | 4956185 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 883169 |
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| End bp | 884614 |
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| Gene Length | 1446 bp |
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| Protein Length | 481 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 640179998 |
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| Product | type II secretion system protein E |
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| Protein accession | YP_001112188 |
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| Protein GI | 134298692 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG4962] Flp pilus assembly protein, ATPase CpaF |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | TTGTTGAAAG CGATAAAAGG TAAGTTTCAA AAAGTAAATT ATGAGGTGCA GCAACACCAG
ACAGAACAAC TCGATCCAAA GGTTAAAACG GAGCAAATTA TATCCAAATT ACACTCCATT
AAGGATGGCT ACATCGTAGA GCAGATAGGT GAAAAATCCT TTGAGCAAAC AAAAGATATT
GTGTTAAACC TGCTTTCAGA AACAACCATA CTCACACAAA ATGATATCGA ACATATTAAC
GAACTGGAAA AGAAGTCAAT GGTCGCCTGT GCCCATTCTG CCCTTCAACT GAAGAAAATT
ATCTTTGGTT TAATGCAAAG ATTTGGCATA ACCGTAAGAG ATATGACTAT TCAAGAGGTA
GTTGATCAGA TATTTAACGA AAAATGGGGC CTTGGTTCTG TACAGGAACT ATATTCTGAT
CCGGAAGTTG ACGAGGTTGA GATCATTGGT CCAGACAATG TTTTCAGTAT AAGAAAGGGT
AAATATTGTA AAGAAGCTAT CAAACTAAAG CCTGAAGAAC TTGATGCTAT GGTCATAAAA
CTTCTGCGGG AATCTGCAGA TCTTACCACA AGAAGGCCAT TTATACGAAC TGCCAGGAAA
GATAAAACCA GGGTTTTTAT TACCGGCGAT CCATTGACCA AACAGATCAC CATAACATTA
AGAAAAAAGG ATACCTTTCT TTATACCAAA GAAAGGCTTG AATCCAATGG CACCATGGAT
GCTAAAACAT ACGATCTAAT GGCCCTGATT TTTAAATGGC TACTTAATGT ACTCATTTCT
GGGCCGGTGA ACTCTGGTAA AACCACACAG CTTGTTCACT TCTTTCAATA CCGGGAACCA
GAACTCAGAA CCGTTGTTTT GGAACCAAAA CTAGAAATGA TGCTTTTTGA GACATACCCA
GGACGCAATA TTATTCAATT GGAAGAACAG CCCCAGCTAG GTATTAACCT AAAAACCATG
TTCAATGATG TAACACTTCA AATATCTCCT GTAAGTGTAA TTATCGGTGA GATATTGGGT
GGCAATGAAA TCAGGGAAGC CGTTAAGGGC GGTGTTAGAG GTCAAAAGGG CAACTTATCC
ACTTTCCACT CAAAGAAGAT TATCGATGCC CTGTACAATA TGGCCTTGAT CTACATTGAA
GAGACTGACT CTAAATCAAT CACCATGGAC GTAGCCATGC GCCGGGTGGT ACAGGCCTAT
GATGTTATCA TCCAGTTAGA TACCATGCCA CGAACTGGTC AGAAGAAGAT TGTTCATATT
GCCGCCCCAT ACCTGGAGGA TGGAGAAATA AAATTACACG ATATCGTGAC ATGGCATCCA
GAAAGCGAAG ATGATTACTT TATCGGCAGT TGGCAGCACC ATTCCCTACC TAAATGGATT
GTTGAAGAAA TGTTTCGGAA TGGACTGTCT AAAGCAAAAC TCCGGGAGGC TGGTTATTCA
TGGTAG
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| Protein sequence | MLKAIKGKFQ KVNYEVQQHQ TEQLDPKVKT EQIISKLHSI KDGYIVEQIG EKSFEQTKDI
VLNLLSETTI LTQNDIEHIN ELEKKSMVAC AHSALQLKKI IFGLMQRFGI TVRDMTIQEV
VDQIFNEKWG LGSVQELYSD PEVDEVEIIG PDNVFSIRKG KYCKEAIKLK PEELDAMVIK
LLRESADLTT RRPFIRTARK DKTRVFITGD PLTKQITITL RKKDTFLYTK ERLESNGTMD
AKTYDLMALI FKWLLNVLIS GPVNSGKTTQ LVHFFQYREP ELRTVVLEPK LEMMLFETYP
GRNIIQLEEQ PQLGINLKTM FNDVTLQISP VSVIIGEILG GNEIREAVKG GVRGQKGNLS
TFHSKKIIDA LYNMALIYIE ETDSKSITMD VAMRRVVQAY DVIIQLDTMP RTGQKKIVHI
AAPYLEDGEI KLHDIVTWHP ESEDDYFIGS WQHHSLPKWI VEEMFRNGLS KAKLREAGYS
W
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