| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0686 |
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| Symbol | |
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| ID | 4956848 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 740503 |
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| End bp | 741228 |
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| Gene Length | 726 bp |
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| Protein Length | 241 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640179860 |
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| Product | sporulation sigma factor SigE |
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| Protein accession | YP_001112050 |
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| Protein GI | 134298554 |
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| COG category | [K] Transcription |
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| COG ID | [COG1191] DNA-directed RNA polymerase specialized sigma subunit |
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| TIGRFAM ID | [TIGR02835] RNA polymerase sigma-E factor
[TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.144622 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | TTGAAAAACG TTTGGCATTT TAAAATTCTG ATTAGAATCT ATTTAGCCCG AGTTATACAT
TGGCTTGGAT ACCAACAGGA AGTTTATTAC GTAGGAAGTA GTGAGGCTTT GCCCCCACCT
CTTTCCATTG ATGAAGAGAT TGACTTAATT GAGCGATTGG GAGACGGTGA CCTAAAAGTT
AAGAATGTAC TAATAGAAAG GAATCTCCGT CTCGTAGTAT ACATCGCCCG AAAGTTTGAG
AACACCGGCA TAGGGATAGA GGATCTGGTG TCTATAGGGA CTATTGGTCT AATTAAAGCT
GTTAATACCT TTGATCCACA CAAGAAAATT AAACTTGCCA CCTATGCGTC CCGATGTATC
GAAAATGAAA TTTTAATGCA CCTAAGGAGA AATAACAAAA CCCGTTCTGA AGTCTCCTTT
GATGAACCTT TAAACATAGA CTGGGATGGC AACGAGTTGT TGCTTTCAGA TGTGCTGGGG
ACTGAAAATG ATATTATTTA CAAAAACATA GAGGAAGAAG TTGATAAAAA ACTTTTGCAT
CAGGCATTAT TAAAACTTTC CGGACGAGAA AGGCGAATTA TGGAACTTCG ATTTGGACTC
AATAACGGTT CAGAAAAGAC TCAAAAAGAG GTTGCAGACA TGCTGGGGAT ATCCCAATCC
TATATTTCCC GGTTAGAAAA ACGTATTATT AAGCGCTTGA AAAAAGAAAT TCATCGCATG
GAGTAA
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| Protein sequence | MKNVWHFKIL IRIYLARVIH WLGYQQEVYY VGSSEALPPP LSIDEEIDLI ERLGDGDLKV
KNVLIERNLR LVVYIARKFE NTGIGIEDLV SIGTIGLIKA VNTFDPHKKI KLATYASRCI
ENEILMHLRR NNKTRSEVSF DEPLNIDWDG NELLLSDVLG TENDIIYKNI EEEVDKKLLH
QALLKLSGRE RRIMELRFGL NNGSEKTQKE VADMLGISQS YISRLEKRII KRLKKEIHRM
E
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