| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0661 |
|---|
| Symbol | |
|---|
| ID | 4956011 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | - |
|---|
| Start bp | 711926 |
|---|
| End bp | 713911 |
|---|
| Gene Length | 1986 bp |
|---|
| Protein Length | 661 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 43% |
|---|
| IMG OID | 640179835 |
|---|
| Product | small GTP-binding protein |
|---|
| Protein accession | YP_001112025 |
|---|
| Protein GI | 134298529 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG0370] Fe2+ transport system protein B |
|---|
| TIGRFAM ID | [TIGR00231] small GTP-binding protein domain
[TIGR00437] ferrous iron transporter FeoB |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 8 |
|---|
| Plasmid unclonability p-value | 0.252074 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCTCACT GCCATGGTTG CAGTATTCAA ATTGATATTC CCGAAGGAGC TCGGCGCATT
GTTTTGGCAG GCAACCCAAA TGCTGGTAAA TCAGTATTTT TTAATTACTT AACTGGTATG
TATGTGGATG TATCCAATTA CCCCGGTACT ACCCTGGAGA TATCCCACGG TCTTCTTCAA
GGGGATGTCG TAATTGATAC CCCGGGGGTT TATGGAATTT CTTCTTTTAA TGACGAAGAA
AGGGTGGCCC GGGATGTTAT TTTAACAGCC GATGTGGTTA TTAACGTTGT AAACGCGGTT
TACCTAGAAC GGGATTTATT CCTTACCCAA CAAATTATAG ATACTGGCGT TCCTGTAATC
ATTGCCCTGA ATATGGTAGA TGAAGCTGAA AAACAGGGTA TGACAATAAA CAACCAATTA
TTAAGCCAAT TGCTAGGTGT ACCTGTTATT CCTACCGTGG CCATTAAAAA ACAAGGCATG
AAGGAAATAA AGGAAAACAT TGGGCAGGCA CGTTCAGGGC AGTCAGATAC AGAACTCCAA
AAAGAAATGG ATAAACTGGT TAACCGGGTA GGTTCCCGTG GTGAAGCCCT GTTGATTATG
GAAGGCGATG CTACAGTTGC CGAACGTCAT GGTCTTGAAC CCCTAAATAA AAGGGAGGAT
ATTTACCTGC AGCGAAGACA GCGTGTTAAC CAAATTGTTA CTCATGTGGT CAAGGATATC
AGTAAAAAAA CCGCTTTCAG TAATATCTTA AGCCGTATGA TGATCAAACC TTTAACCGGA
ATTCCCATTC TATTTTTAGC ACTCTATACC ATGTATCAGA TAATTGGGGT CTTTGTGGCC
GGTACAGTTG TAGGGTTTAC AGAGGAAACC CTTATGATCG GACACTTCGA ACCTGCTGTA
CGTTCCTTTG TTGGTAACTT TATCAGTGAA CAGTCCACTT TGGGAACGAT CCTTATTGGC
GAATTTGGCC TCCTTACAAT GACTTTTACC TATGTGCTGG GGTTATTAAT GCCCTTGGTT
ATAGGATTTT ACTTTTTCCT GTCCTTGTTT GAAGATTCCG GTTACCTTCC CCGCCTAGCT
ACCCTGGTGG ATAGACTTCT CACCAGCATT GGTTTAAATG GCCGGGCTGT TATTCCATTA
ATTCTTGGCC TGGGCTGTGT TACCATGGCT ACTATTACCA CTCGTCTGTT AGGTTCCGAG
CGGGAGCGCC GCATTGCTAT TTTTCTATTG GGGTTAGCGA TCCCATGCTC TGCTCAATTG
GGAGTCATTG CTGGAATGTT AGCCTCTGTG GGCCCTGAGT TTGTACTTCT GTATTCTTTA
GTTATCTTTG CAGTTCTAGT GGTTGTGGGT ACTTTAATGA ATTCGCTATT ATCCGGTCAG
TCTTCTGACC TCTTAATCGA TCTACCACCG CTACGTGTGC CACGTATTCA TAATGTAATG
ACCAAGACTG GAATTAAATC TTATCAGTTC TTAAAGGAAG CTTTCCCCCT CTTTGCTCTT
GGTGCTTTAA TAATTAGTAC CTTTCAGGTT ACTGGTATTC TGGTTGCCTT GCAAAACATC
CTAGCTCCTT TGACGGTAAA TTGGCTAGGG TTACCCAAGG AAGCTGCCAC AGCCTTCATT
ATGGGTATTG TACGTCGAGA TTTTGGTGCC GCGGGCTTGG CAGGTATGCC GTTGACATCC
ATTCAAACAG TGATATCCTT AATTACCATT ACCCTCTTTG TTCCTTGCAT TGCTTCCATT
TTAGTAATGT TTAAGGAACG CAACAAGAAG GAGGCACTCC TTATGTGGGT AAGTACCTGG
GTAATTGCCT TCTTAATTGG TGGTATTGTT GCTCAACTTT CCGCTCTACT GGGAGTTGCT
ACACCGGCAC AAGTATTTAC CGTGATGGCA GTGGTTATCG CTCTAACAGC CCTGGTGATT
GTGGGCGTAA GATTGTTTAA AAAGCAAAAC ATACAAAGTA ATTCTACTTC AAAGGGCGTG
GTTTAA
|
|---|
| Protein sequence | MSHCHGCSIQ IDIPEGARRI VLAGNPNAGK SVFFNYLTGM YVDVSNYPGT TLEISHGLLQ
GDVVIDTPGV YGISSFNDEE RVARDVILTA DVVINVVNAV YLERDLFLTQ QIIDTGVPVI
IALNMVDEAE KQGMTINNQL LSQLLGVPVI PTVAIKKQGM KEIKENIGQA RSGQSDTELQ
KEMDKLVNRV GSRGEALLIM EGDATVAERH GLEPLNKRED IYLQRRQRVN QIVTHVVKDI
SKKTAFSNIL SRMMIKPLTG IPILFLALYT MYQIIGVFVA GTVVGFTEET LMIGHFEPAV
RSFVGNFISE QSTLGTILIG EFGLLTMTFT YVLGLLMPLV IGFYFFLSLF EDSGYLPRLA
TLVDRLLTSI GLNGRAVIPL ILGLGCVTMA TITTRLLGSE RERRIAIFLL GLAIPCSAQL
GVIAGMLASV GPEFVLLYSL VIFAVLVVVG TLMNSLLSGQ SSDLLIDLPP LRVPRIHNVM
TKTGIKSYQF LKEAFPLFAL GALIISTFQV TGILVALQNI LAPLTVNWLG LPKEAATAFI
MGIVRRDFGA AGLAGMPLTS IQTVISLITI TLFVPCIASI LVMFKERNKK EALLMWVSTW
VIAFLIGGIV AQLSALLGVA TPAQVFTVMA VVIALTALVI VGVRLFKKQN IQSNSTSKGV
V
|
|---|
| |