| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0651 |
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| Symbol | |
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| ID | 4955834 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Desulfotomaculum reducens MI-1 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009253 |
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| Strand | + |
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| Start bp | 701523 |
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| End bp | 703247 |
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| Gene Length | 1725 bp |
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| Protein Length | 574 aa |
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| Translation table | 11 |
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| GC content | 38% |
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| IMG OID | 640179825 |
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| Product | diguanylate cyclase |
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| Protein accession | YP_001112015 |
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| Protein GI | 134298519 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000777615 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAAAGTAC TGCAATTTTT TATTTTTAAT AGACGTATAC AGACCTCATT GTTAATAGGC
TTTATTGTAT TTATTATTTT TCCTGCATTT TTAGTAGGGT TGTTCAGTTT TTCGCAAAGT
AAAGCAGTTA TAGAACGATC GGTCTTTAAT ACATTGGACT ATCTGGCAGA TGCCCAAGAG
AAGTCTATTA ACAACTGGAT TATGAGCCGT AAAACATTTA TTAAGGGCCT TGCCCAGAAT
AAATATATGC AGGTTATGGA TAATCAAGAG AGTGCTAAAA TTTTAAGAGA TGCATTAAAA
ATGGATAATA ATTTTCGCTC TCTGGTGCTA GTGGGGAAAG ACGGTCGAAT AAAAGTAGAT
CCGGAACTGC CAAACCAGAC GATAAATACT TATGTAGGGG ATCGAGAATA CTTTCAACAG
GCTATTTCCG GTACAACCTT TGTCAGTGAA GTTCTAGTAA GTCGAAACAC TAAGCGGCCT
GTTATGATGG TGGCTACTCC GGTTAAGCAA GGTGATGAAA TAGTAGGCGT TTTATCTGGT
ATTGTTAACA TTTCTGTGAT TACAGAAATA ACCCAGCATA ATTCTCCTGG TGTACTTGGT
GAATCATATT TAATTAATGA TAAAGGATTA ATGGTAAGCG AATCAAGATT TACTACATCA
ACGGAGCCGC TTAAATTGAA AGTACAAAAC CACCCCGCCC TCACTTCTAG AGAAGGAGAG
AAGGGGAAAG GGATTTATAA AAATTATCTT AACCGTACGG TTTTTGGCAC TTATCGGTGG
TTACCTGAGA TGAGACTAAG TCTAGTTGTA GAGAAAGACT ATGAGAGGGG TTTAATGGAA
TATGGCTTAG CAACTTACTT AAAAGTTTTG GGCGCTGCTT GCCTAATAAT AGGGTTTTTC
CTGGTTTTTG CTATAATCTA TTCCAGAAGA TTAACCAAGC CACTGGAAAG GCTGGCTGCG
GAAGTAAATA ACATTGCCAA GGGTAATTTT CTATCAATTA TTGATCTTAA AGCCAATCGG
GAGGTGCAGG AATTAAGCAG GGCTATTAAT AACATGTCTG CTAATTTACT GGAAAAAACC
ACCCAATTAA ATAACCTAAT TAAGCAACTG GAACAAAATA GGGATGATTT GCATGAAGAA
AAAAATAAGC TTGTTAAAAT TTCAATTACC GATGAGCTAA CAGACCTTTA TAACCGACGA
TACCTGAACA AAGAATTACT GCGGGTTATT GACCTTTGCA GCACCTTAAA TAAAAATATT
TCACTTTTAA TGTTGGACCT GGATCGTTTT AAAGCAGTCA ATGATAACTA TGGCCATGCT
ACAGGGGACA CGGTACTAAA GGAATTTGCT GAAATACTCA GAAGGTGTAG CAGGGGAACC
GATGTTGTTG GTCGGTTTGG CGGTGAGGAA TTCGTGATTA TTATTCCCTT TGTCAGTGCT
GAGCGGGTAG CCCTTATTGC TGAAAGGATT CGGCAAGAAA TAAGTAACTT TGTTTTTGAT
GAGGGAAACA GTAATCTTCA TGTGACAGTT AGTATTGGGG TGGTTACGGT AAAATCCCTA
GTGACAAGCA CAACGGCTGA AGTGGCAGAA AAATTAATCA AAAAAGCTGA TGAGAATCTA
TACCAAGCAA AAAATTCCGG AAGAAACAAA GTGGTTCACC GGGAGATCAA AATAGGGGAA
TTATTTGAAT GTTGCCCTCC AGAGAAAAAA ACGTCCGATT CCTGA
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| Protein sequence | MKVLQFFIFN RRIQTSLLIG FIVFIIFPAF LVGLFSFSQS KAVIERSVFN TLDYLADAQE
KSINNWIMSR KTFIKGLAQN KYMQVMDNQE SAKILRDALK MDNNFRSLVL VGKDGRIKVD
PELPNQTINT YVGDREYFQQ AISGTTFVSE VLVSRNTKRP VMMVATPVKQ GDEIVGVLSG
IVNISVITEI TQHNSPGVLG ESYLINDKGL MVSESRFTTS TEPLKLKVQN HPALTSREGE
KGKGIYKNYL NRTVFGTYRW LPEMRLSLVV EKDYERGLME YGLATYLKVL GAACLIIGFF
LVFAIIYSRR LTKPLERLAA EVNNIAKGNF LSIIDLKANR EVQELSRAIN NMSANLLEKT
TQLNNLIKQL EQNRDDLHEE KNKLVKISIT DELTDLYNRR YLNKELLRVI DLCSTLNKNI
SLLMLDLDRF KAVNDNYGHA TGDTVLKEFA EILRRCSRGT DVVGRFGGEE FVIIIPFVSA
ERVALIAERI RQEISNFVFD EGNSNLHVTV SIGVVTVKSL VTSTTAEVAE KLIKKADENL
YQAKNSGRNK VVHREIKIGE LFECCPPEKK TSDS
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