| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0542 |
|---|
| Symbol | |
|---|
| ID | 4957634 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 589367 |
|---|
| End bp | 589630 |
|---|
| Gene Length | 264 bp |
|---|
| Protein Length | 87 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 34% |
|---|
| IMG OID | 640179721 |
|---|
| Product | CRISPR-associated Cas2 family protein |
|---|
| Protein accession | YP_001111911 |
|---|
| Protein GI | 134298415 |
|---|
| COG category | [L] Replication, recombination and repair |
|---|
| COG ID | [COG1343] Uncharacterized protein predicted to be involved in DNA repair |
|---|
| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.822722 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTTTGTTA TCCTGGTCTA TGATGTAAAT CAAAAGCGGG TTGCAAAGGT ATTAAAAAGG
TGTCGACAAT ATTTAACCTG GGTACAAAAC TCGGTATTGG AGGGTGAAAT ATCTGACGTA
AATCTTAAAA AGCTTAAAAT GGAGTTGCAA AAGATCATTA ATAAAGAAGA GGACTCGGTG
ATTTTTTATA CCATGAGAAC AACCAATTAT TCTTCCAGGG AGTTAATTGG ATTACAGAAA
AACGAGGAAG GGAATATCAT TTAA
|
|---|
| Protein sequence | MFVILVYDVN QKRVAKVLKR CRQYLTWVQN SVLEGEISDV NLKKLKMELQ KIINKEEDSV
IFYTMRTTNY SSRELIGLQK NEEGNII
|
|---|
| |