Gene Dred_0538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0538 
Symbol 
ID4957584 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp583105 
End bp583833 
Gene Length729 bp 
Protein Length242 aa 
Translation table11 
GC content53% 
IMG OID640179717 
ProductCRISPR-associated Cas5 family Hmari subtype protein 
Protein accessionYP_001111907 
Protein GI134298411 
COG category 
COG ID 
TIGRFAM ID[TIGR02592] CRISPR-associated protein Cas5, Hmari subtype
[TIGR02593] CRISPR-associated protein Cas5, N-terminal domain 


Plasmid Coverage information

Num covering plasmid clones30 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGATGAAAC TAATTGCTTT CCGCCTTAGT GGCCGGTTTG GTCATTTTCT CCGGGCGGAG 
GCGGGGACCA GTGCCCTAAG CTACCCGGTG CCGCCCCGGA CAGTTTTACT GGGCATCCTG
GGGGCGGTAC TGGGCCTGGA AAAGGATCTC CCCCAGGAAC TGTTGGAGCC GCTACACATT
GCCCTGGCTG GGCCGGTACC CCAAAGCCAC TGGCATAAGG CTAAACTGCG TAAGGACCCG
CCCGAAGCAC TGCCCCAGGT GGTGAAAAAT AACCAAAAAC AGGAAAAGAC TACAAAGCCA
GAAATGGCTA CGTTAATCAC CCAGGAATGG CTGTTTAACC CTGCTTACAC TATTTGGGTT
GCCTTGCCAG AACCCTACCA TCAACAATTG GAACAGCGAC TAAAGGAGCG GTGCTGGCAT
TTTCAACCCT GCCTAGGCCT TTCAGAGATG ATGGCAGATA TCGAATACTT GGGGACCTTA
ATGGCAGAAA AATTGCCCAG GGGCAGTTAC CCCGTAACAT CCATTATTCC GCAGGAACAG
GCCAAACTAG ATTTAACCCA GGTATACGAC CAGGAGCTGG CACTTCAACC CCTCCGTATG
CCCAGAACCG TTACTTCTAG CCGGGTATTT GGCCACTCTA GCTACTTCAT TGAAACTAAG
GGCCACCCGG TGATGGTAGA GACAGAGCAA GCCTACCAAG TTGGGGACCG GGTTTTGATG
TTTATATGA
 
Protein sequence
MMKLIAFRLS GRFGHFLRAE AGTSALSYPV PPRTVLLGIL GAVLGLEKDL PQELLEPLHI 
ALAGPVPQSH WHKAKLRKDP PEALPQVVKN NQKQEKTTKP EMATLITQEW LFNPAYTIWV
ALPEPYHQQL EQRLKERCWH FQPCLGLSEM MADIEYLGTL MAEKLPRGSY PVTSIIPQEQ
AKLDLTQVYD QELALQPLRM PRTVTSSRVF GHSSYFIETK GHPVMVETEQ AYQVGDRVLM
FI