Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0538 |
Symbol | |
ID | 4957584 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 583105 |
End bp | 583833 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640179717 |
Product | CRISPR-associated Cas5 family Hmari subtype protein |
Protein accession | YP_001111907 |
Protein GI | 134298411 |
COG category | |
COG ID | |
TIGRFAM ID | [TIGR02592] CRISPR-associated protein Cas5, Hmari subtype [TIGR02593] CRISPR-associated protein Cas5, N-terminal domain |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGATGAAAC TAATTGCTTT CCGCCTTAGT GGCCGGTTTG GTCATTTTCT CCGGGCGGAG GCGGGGACCA GTGCCCTAAG CTACCCGGTG CCGCCCCGGA CAGTTTTACT GGGCATCCTG GGGGCGGTAC TGGGCCTGGA AAAGGATCTC CCCCAGGAAC TGTTGGAGCC GCTACACATT GCCCTGGCTG GGCCGGTACC CCAAAGCCAC TGGCATAAGG CTAAACTGCG TAAGGACCCG CCCGAAGCAC TGCCCCAGGT GGTGAAAAAT AACCAAAAAC AGGAAAAGAC TACAAAGCCA GAAATGGCTA CGTTAATCAC CCAGGAATGG CTGTTTAACC CTGCTTACAC TATTTGGGTT GCCTTGCCAG AACCCTACCA TCAACAATTG GAACAGCGAC TAAAGGAGCG GTGCTGGCAT TTTCAACCCT GCCTAGGCCT TTCAGAGATG ATGGCAGATA TCGAATACTT GGGGACCTTA ATGGCAGAAA AATTGCCCAG GGGCAGTTAC CCCGTAACAT CCATTATTCC GCAGGAACAG GCCAAACTAG ATTTAACCCA GGTATACGAC CAGGAGCTGG CACTTCAACC CCTCCGTATG CCCAGAACCG TTACTTCTAG CCGGGTATTT GGCCACTCTA GCTACTTCAT TGAAACTAAG GGCCACCCGG TGATGGTAGA GACAGAGCAA GCCTACCAAG TTGGGGACCG GGTTTTGATG TTTATATGA
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Protein sequence | MMKLIAFRLS GRFGHFLRAE AGTSALSYPV PPRTVLLGIL GAVLGLEKDL PQELLEPLHI ALAGPVPQSH WHKAKLRKDP PEALPQVVKN NQKQEKTTKP EMATLITQEW LFNPAYTIWV ALPEPYHQQL EQRLKERCWH FQPCLGLSEM MADIEYLGTL MAEKLPRGSY PVTSIIPQEQ AKLDLTQVYD QELALQPLRM PRTVTSSRVF GHSSYFIETK GHPVMVETEQ AYQVGDRVLM FI
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