Gene Dred_0429 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0429 
Symbol 
ID4955538 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand- 
Start bp469750 
End bp470439 
Gene Length690 bp 
Protein Length229 aa 
Translation table11 
GC content37% 
IMG OID640179599 
Producthypothetical protein 
Protein accessionYP_001111800 
Protein GI134298304 
COG category[S] Function unknown 
COG ID[COG3503] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones2 
Plasmid unclonability p-value0.00000311918 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCTCATGT CGAAAACTGT AAACCGCCTA TGGGAACTGG ATTTTTTACG TGGTGTAGCC 
ATTCTTTTGA TGGTCTTCTT TCATTTAATG TACGACTTAC ATGAATTTTA TAATCTACCT 
ATCCATTATC AAGAAGGTTT TATTTTTCTT ACGGGGAAAG CCTCTGCCAC CTTGTTTATT 
CTCCTGGCCG GTGTTAGTTG CTCGTTAAGT AAAAGTAACC TGAAAAGGGG CCGTAACCTC 
CTTTTCATTG CAATACTATT AACCATCATC ACAATGATAG CAGTTCCAGG TTCTAATATT 
ATTTTTGGCA TCTTGCATTT TTTAGCCATC AGTATACTTT TGTATCCCAT ATTTCACCGT 
TGGAGTCCAG GTATCCTAAT GGTTTTCGGA ACGATTATCA TTGGTTTACA GTATTTCACA 
GCACTACTGA CCCCATCCAC AAACCTTCTA TTCCCTCTGG GTTTTATATC AAAGGATTTC 
TTTTCTGTGG ATTATTATCC TTTAATTCCC TACCTGGGCC TATTTTTATA TGGTATCGCT 
CTGGGTAAGC TATTGTATCC TGATAAAAAG AGTCGGTTTT TTTATTGGTC CTTTGCAAAA 
CCCCTTATCC TATTGGGACA ACATTCTCTT TTTATTTATC TTACTCATCA ACCTATTCTT 
TTGCTGCTTC TCTATCTTTT CTTTAAGTAA
 
Protein sequence
MLMSKTVNRL WELDFLRGVA ILLMVFFHLM YDLHEFYNLP IHYQEGFIFL TGKASATLFI 
LLAGVSCSLS KSNLKRGRNL LFIAILLTII TMIAVPGSNI IFGILHFLAI SILLYPIFHR 
WSPGILMVFG TIIIGLQYFT ALLTPSTNLL FPLGFISKDF FSVDYYPLIP YLGLFLYGIA 
LGKLLYPDKK SRFFYWSFAK PLILLGQHSL FIYLTHQPIL LLLLYLFFK