| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Dred_0135 |
|---|
| Symbol | |
|---|
| ID | 4956647 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Desulfotomaculum reducens MI-1 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009253 |
|---|
| Strand | + |
|---|
| Start bp | 142077 |
|---|
| End bp | 143627 |
|---|
| Gene Length | 1551 bp |
|---|
| Protein Length | 516 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 48% |
|---|
| IMG OID | 640179289 |
|---|
| Product | phosphoglyceromutase |
|---|
| Protein accession | YP_001111510 |
|---|
| Protein GI | 134298014 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG0696] Phosphoglyceromutase |
|---|
| TIGRFAM ID | [TIGR01307] 2,3-bisphosphoglycerate-independent phosphoglycerate mutase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | TTGCAGCATC AATATCACCC CCTGGCCTTG ATTATCTTAG ATGGCTGGGG TTTACACCGG
GATGAAAAGG GTAATGCCAT CGCCTGTGCC AATATACCAT ATGTCAAAGG ATTGCTAAAA
AGGTATCCGT CCACTAGTTT GGCCTGCTCC GGTGAGGCTG TGGGGTTGCC CGCAGGGCAG
ATGGGAAATT CCGAGGTGGG GCATCTGAAC ATGGGTGCCG GACGGGTCGT CTATCAGGAA
CTTACCCGCA TTACCAAAGC CATTAAGGAT GGTGATTTTT TCCAAAACCA GGAACTATTA
AGGGTTATCC AAGGGGCCAA GAAAAGTAAT TCGGCACTTC ATATTATGGG TCTTTTATCA
GATGGCGGGG TACATAGCCA TATTCGACAT ATATTTGCTG CCCTGGAATT GGCTGCGAGG
CAGGGACTGT CCAAGGTCTA TGTTCATGCC TTTTTGGATG GCCGAGATGT TCCTCCTTCT
AGTGCCAAGG GATATATGAA TGCGCTTTTA GCTAAGATGA AAGAACTGGG CGTTGGACAG
GTGGCCACTG TCTCCGGACG TTATTATGCC ATGGATAGAG ATAGTCGCTG GGAGCGAACG
GAATTAGCCT ATCGAGCCAT GGTTTTCGCC GAAGGATTGC AGGCTAACTC TCCTGTTGAA
GCCATCGATG TGGGTTACCA GCGGGGGGAA ACCGATGAAT TTATTAAGCC CACCGTTATC
ACCGATGACT GTAAACAACC CATCGCCAGG GTAGCTGACG GAGACTCTAT CATTTTTATG
AACTTCCGTC CGGACCGGGC CAGACAGATC ACCCGATCCT TTGTGGATGA TGATTTCTCC
GGCTTTCAAC GGGGTACTGG CGGGCCAAAG GTGCATTTTG TTTGCTTAAC GGTTTATGAT
AAAACCATTA AAACACCGGT GGCTTTTCCG CCGACCCAGC TTGTTCACAC ACTGGGTGAA
TGGTTAGACA AGCAGGGGCT AAAACAATTA CGTTTGGCAG AGACCGAAAA GTATGCCCAC
GTTACCTTTT TCTTTAACGG GGGTGTGGAA GCCCCAAATC CTAATGAAGA AAGAGTACTG
ATTCCTTCCC CCAAGGTAGC AACCTATGAT CAAAAGCCTG AAATGTCTGC CCAGGAAGTG
GCAGAGGCAT TTATTAAGAA ATTCAATACT GCACAATATG ATGTTTATAT AACTAATTTT
GCTAACCCCG ATATGGTGGG ACATACTGGG AATATGGCGG CAACCAGAAT TGCGGTGGAG
ACAGTGGACA AATGCGTCGG GAAAATTGTA TCAACGGTAT TGGAAAAAGC AGGGACCGTT
ATTATTACAG CTGACCATGG CAATGCAGAA AAAATGCTTG ATGAAAACGG TGGCGCTTAT
ACAGCCCATA CCACGAACCC GGTTCCTTTT ATACTAGTTG GTGATCGCTA TGAGGGTGGC
AAGCTTAAGG AATGTGGCAG CTTACAGGAT ATTGCCCCTA CGATGCTGGA AATTTTGGGT
CTGCCTAAAC CTCCGGAGAT GACCGGAGAG AGTCTGCTGC CCAAGGGATA G
|
|---|
| Protein sequence | MQHQYHPLAL IILDGWGLHR DEKGNAIACA NIPYVKGLLK RYPSTSLACS GEAVGLPAGQ
MGNSEVGHLN MGAGRVVYQE LTRITKAIKD GDFFQNQELL RVIQGAKKSN SALHIMGLLS
DGGVHSHIRH IFAALELAAR QGLSKVYVHA FLDGRDVPPS SAKGYMNALL AKMKELGVGQ
VATVSGRYYA MDRDSRWERT ELAYRAMVFA EGLQANSPVE AIDVGYQRGE TDEFIKPTVI
TDDCKQPIAR VADGDSIIFM NFRPDRARQI TRSFVDDDFS GFQRGTGGPK VHFVCLTVYD
KTIKTPVAFP PTQLVHTLGE WLDKQGLKQL RLAETEKYAH VTFFFNGGVE APNPNEERVL
IPSPKVATYD QKPEMSAQEV AEAFIKKFNT AQYDVYITNF ANPDMVGHTG NMAATRIAVE
TVDKCVGKIV STVLEKAGTV IITADHGNAE KMLDENGGAY TAHTTNPVPF ILVGDRYEGG
KLKECGSLQD IAPTMLEILG LPKPPEMTGE SLLPKG
|
|---|
| |