Gene Dred_0061 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagDred_0061 
Symbol 
ID4958625 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameDesulfotomaculum reducens MI-1 
KingdomBacteria 
Replicon accessionNC_009253 
Strand
Start bp69214 
End bp70062 
Gene Length849 bp 
Protein Length282 aa 
Translation table11 
GC content46% 
IMG OID640179215 
ProductPSP1 domain-containing protein 
Protein accessionYP_001111436 
Protein GI134297940 
COG category[S] Function unknown 
COG ID[COG1774] Uncharacterized homolog of PSP1 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00221406 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTCGGTTA GAGTGGTTGG AGTACGCTTT AAGAAAGCCG GAAAGGTTTA TTATTTTGAC 
CCCGTTGAGA TCCCCTTGCA GCAGGGGCAA CACGTGGTGG TTGAAACCAC ACGGGGGATT
GAGTATGGTG AAGTGGTGGT GGCTCCCCGG GATGTACCGG ATGAAGAGGT TGTTGCTCCA
TTAAAACAAG TTCTTCGGCA AGCGACACCG GAAGATGATC AACAGGTGGC TGAAAACCGA
GAGAAGGAAC AGCGGGCCTA TGAAGTGGCC TTGGAGAAAA TAGCGTTGCA TCAGTTACCT
ATGAAATTAA TCAGTGTAGA GCAAACCTTT GACGGAAATA AAATTATCTT CTACTTTACC
GCAGATGGTA GAATTGATTT CCGTGAATTG GTAAAGGATT TAGCGGCTGT TTTTCGTACA
CGCATTGAAT TACGGCAGAT CGGTGTACGG GATGAGGCAA AGATGGTGGG TGGTTTAGGA
TGCTGCGGAC GAGAACTTTG TTGTTCTTCC TGGTTGGCAG ATTTTGCACC GGTATCCATT
CGGATGGCCA AGGAACAAAA CCTGTCCTTA AATCCTACCA AGATATCAGG CATCTGTGGT
CGTCTAATGT GCTGTTTAAA ATATGAAAAT GACGTTTACG AAGAGGCTAA GGCTGGTTAC
CCCGACCTAG GGACCCAAGT ATTGGCCCCG GAAGGGGAAG GGAAAATTGT TGCGGTAAAT
ATTTTCCGCA ACACCGTAAG CGTAGAATTG CAGGAGAGCA AAGCCATTAG AGAATATCCA
TTAAATGAAT TAAAAATAAA AAAAGGCCGA GGTGAATGCA ACTGTGGCTG CCCTGCCCGG
CAGAATTAA
 
Protein sequence
MSVRVVGVRF KKAGKVYYFD PVEIPLQQGQ HVVVETTRGI EYGEVVVAPR DVPDEEVVAP 
LKQVLRQATP EDDQQVAENR EKEQRAYEVA LEKIALHQLP MKLISVEQTF DGNKIIFYFT
ADGRIDFREL VKDLAAVFRT RIELRQIGVR DEAKMVGGLG CCGRELCCSS WLADFAPVSI
RMAKEQNLSL NPTKISGICG RLMCCLKYEN DVYEEAKAGY PDLGTQVLAP EGEGKIVAVN
IFRNTVSVEL QESKAIREYP LNELKIKKGR GECNCGCPAR QN