Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Dred_0061 |
Symbol | |
ID | 4958625 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Desulfotomaculum reducens MI-1 |
Kingdom | Bacteria |
Replicon accession | NC_009253 |
Strand | + |
Start bp | 69214 |
End bp | 70062 |
Gene Length | 849 bp |
Protein Length | 282 aa |
Translation table | 11 |
GC content | 46% |
IMG OID | 640179215 |
Product | PSP1 domain-containing protein |
Protein accession | YP_001111436 |
Protein GI | 134297940 |
COG category | [S] Function unknown |
COG ID | [COG1774] Uncharacterized homolog of PSP1 |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 6 |
Plasmid unclonability p-value | 0.00221406 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGTCGGTTA GAGTGGTTGG AGTACGCTTT AAGAAAGCCG GAAAGGTTTA TTATTTTGAC CCCGTTGAGA TCCCCTTGCA GCAGGGGCAA CACGTGGTGG TTGAAACCAC ACGGGGGATT GAGTATGGTG AAGTGGTGGT GGCTCCCCGG GATGTACCGG ATGAAGAGGT TGTTGCTCCA TTAAAACAAG TTCTTCGGCA AGCGACACCG GAAGATGATC AACAGGTGGC TGAAAACCGA GAGAAGGAAC AGCGGGCCTA TGAAGTGGCC TTGGAGAAAA TAGCGTTGCA TCAGTTACCT ATGAAATTAA TCAGTGTAGA GCAAACCTTT GACGGAAATA AAATTATCTT CTACTTTACC GCAGATGGTA GAATTGATTT CCGTGAATTG GTAAAGGATT TAGCGGCTGT TTTTCGTACA CGCATTGAAT TACGGCAGAT CGGTGTACGG GATGAGGCAA AGATGGTGGG TGGTTTAGGA TGCTGCGGAC GAGAACTTTG TTGTTCTTCC TGGTTGGCAG ATTTTGCACC GGTATCCATT CGGATGGCCA AGGAACAAAA CCTGTCCTTA AATCCTACCA AGATATCAGG CATCTGTGGT CGTCTAATGT GCTGTTTAAA ATATGAAAAT GACGTTTACG AAGAGGCTAA GGCTGGTTAC CCCGACCTAG GGACCCAAGT ATTGGCCCCG GAAGGGGAAG GGAAAATTGT TGCGGTAAAT ATTTTCCGCA ACACCGTAAG CGTAGAATTG CAGGAGAGCA AAGCCATTAG AGAATATCCA TTAAATGAAT TAAAAATAAA AAAAGGCCGA GGTGAATGCA ACTGTGGCTG CCCTGCCCGG CAGAATTAA
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Protein sequence | MSVRVVGVRF KKAGKVYYFD PVEIPLQQGQ HVVVETTRGI EYGEVVVAPR DVPDEEVVAP LKQVLRQATP EDDQQVAENR EKEQRAYEVA LEKIALHQLP MKLISVEQTF DGNKIIFYFT ADGRIDFREL VKDLAAVFRT RIELRQIGVR DEAKMVGGLG CCGRELCCSS WLADFAPVSI RMAKEQNLSL NPTKISGICG RLMCCLKYEN DVYEEAKAGY PDLGTQVLAP EGEGKIVAVN IFRNTVSVEL QESKAIREYP LNELKIKKGR GECNCGCPAR QN
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