Gene SNSL254_pSN254_0157 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSNSL254_pSN254_0157 
SymboltniB 
ID4929429 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSalmonella enterica subsp. enterica serovar Newport str. SL254 
KingdomBacteria 
Replicon accessionNC_009140 
Strand- 
Start bp139976 
End bp140836 
Gene Length861 bp 
Protein Length286 aa 
Translation table11 
GC content66% 
IMG OID642572455 
Producttransposition protein TniB 
Protein accessionYP_001102030 
Protein GI134047171 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones8 
Plasmid unclonability p-value0.359337 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones86 
Fosmid unclonability p-value1 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGGACGAAT ATCCCATCAT CGACCTGTCC CACCTGCTGC CGGCGGCCCA GGGCTTGGCC 
CGTCTTCCGG CGGACGAGCG CATCCAGCGC CTTCGCGCCG ACCGCTGGAT CGGCTATCCG 
CGCGCAGTCG AGGCGCTGAA CCGGCTGGAA GCCCTTTATG CGTGGCCAAA CAAGCAACGC 
ATGCCCAACC TGCTGCTGGT TGGCCCGACC AACAATGGCA AGTCGATGAT CGTCGAGAAG 
TTCCGCCGCA CCCACCCGGC CAGCTCCGAC GCCGACCAGG AGCACATCCC GGTGTTGGTC 
GTGCAGATGC CGTCCGAGCC GTCCGTGATC CGCTTCTACG TCGCGCTGCT CGCCGCGATG 
GGCGCGCCGC TGCGCCCACG CCCACGGTTG CCGGAAATGG AGCAACTGGC TCTGGCACTG 
CTGCGCAAGG TCGGCGTGCG CATGCTGGTG ATCGACGAGC TGCACAACGT GCTGGCCGGC 
AACAGCGTCA ACCGCCGGGA ATTCCTCAAC CTGCTGCGCT TCCTCGGCAA CGAACTGCGC 
ATCCCGTTGG TTGGGGTAGG CACGCGCGAC GCCTACCTAG CCATCCGCTC CGATGACCAG 
TTGGAAAATC GCTTCGAGCC GATGATGCTG CCGGTATGGG AGGCCAACGA CGATTGCTGC 
TCACTGCTGG CCAGCTTCGC CGCTTCGCTC CCGCTGCGCC GGCCTTCCCC AATTGCCACG 
CTGGACATGG CTCGCTACCT GCTCACACGC AGCGAGGGCA CCATAGGGGA ACTGGCGCAC 
TTGCTGATGG CGGCGGCCAT CGTCGCCGTG GAGAGCGGCG AGGAAGCGAT CAACCATCGC 
ACACTCAGCA TGGCCTGTTG A
 
Protein sequence
MDEYPIIDLS HLLPAAQGLA RLPADERIQR LRADRWIGYP RAVEALNRLE ALYAWPNKQR 
MPNLLLVGPT NNGKSMIVEK FRRTHPASSD ADQEHIPVLV VQMPSEPSVI RFYVALLAAM 
GAPLRPRPRL PEMEQLALAL LRKVGVRMLV IDELHNVLAG NSVNRREFLN LLRFLGNELR 
IPLVGVGTRD AYLAIRSDDQ LENRFEPMML PVWEANDDCC SLLASFAASL PLRRPSPIAT 
LDMARYLLTR SEGTIGELAH LLMAAAIVAV ESGEEAINHR TLSMAC