| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | SNSL254_pSN254_0125 |
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| Symbol | |
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| ID | 4929562 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Salmonella enterica subsp. enterica serovar Newport str. SL254 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009140 |
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| Strand | + |
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| Start bp | 107495 |
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| End bp | 109120 |
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| Gene Length | 1626 bp |
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| Protein Length | 541 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 642572424 |
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| Product | C-5 cytosine-specific DNA methylase |
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| Protein accession | YP_001101999 |
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| Protein GI | 134047248 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0270] Site-specific DNA methylase |
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| TIGRFAM ID | [TIGR00675] DNA-methyltransferase (dcm) |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 75 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTACTA TCGTAAACAC CAAGTTAGGA GAACATCGAG GCAAGAAGCG CGTCTGGCTG
GAAGGCCAAA AGCTACTGCG TGAAGGTTAC TATCCTGGCA TGAAGTATGA TCTGGAGCTG
AAAGATTCCC AGGTTGTGCT TCGCGTCAAA GAGGAGGGTA AGTTCACCAT CAGTAAGCGT
GAGCGCAATG GCCGGGTGTC TCCAATCATC GATCTGACCG TGCAGGAGCT TGCTACCGTT
TTTGACGGTG TAGAGATGCT CCGCGTGTTC ATCCGTAACG GCGCAATTGT GATCTCTGCT
CACCATCAAC AAGAGCGAGT GATCGAGCGC GTCAACCGGC TTATCAGTAA GCTGGAGAAT
GGAGAATCGC TTTCGGTATG CAGCCTCTTT CATGGGGGTG GTGTGCTTGA TAAAGCGATT
CACGCCGGTT TTCACAAGGC GGGAATTGCC AGTGCCATAT CTGTGGCCGT GGAGATGGAA
GGGAAATATC TCGATTCGTC TTTGGCAAAT AACCCGGAGC TTTGGAACGA AGATTCTATT
GTTATCGAAT CGCCAATCCA GGCTGTGAAT CTCAGCAAAC GCCCACCACA GGTGGATGTT
TTGATGGGGG GCATACCGTG TACCGGCGCG TCAAAGTCAG GTCGCAGTAA GAACAAGTTG
GAGTTTGCCG AATCGCATGA GGCGGCAGGT GCCATGTTCT TCAACTTCCT GCAATTCGTA
GAAGCGCTAA ACCCAGCCGT TGTGCTGATT GAGAACGTGC CTGAGTACCA GAACACCGCT
TCGATGGAAG TGATTCGTTC GGTGCTCTCT TCGTTGGGTT ACTCCCTACA AGAGCGCATT
CTCGACGGCA ATGAGTTTGG GGTTATTGAG CGCCGCAAGC GTCTTTGTGT TGTTGCGCTT
TCCCACGGGA TCGACGGGTT TGAACTTGAG AAGGTTCAGC CTGTTCGCAC CAAGGAAAGT
CGCATACAGG ACATCCTGGA GCCAGTTCCG CTCGATTCTG AACGTTGGAA GTCATTTGAC
TATCTGGCTG AGAAGGAGTT GAGAGACAAA GCTGCTGGCA AGGGGTTCTC TCGCCAGCTT
CTGACTGGCG ACGATGAGTT TTGCGGCACC ATAGGTAAGG ACTATGCAAA ATGCAGAAGT
ACCGAACCTT TCATTGTTCA TCCAGAACAG CCGGAGTTGT CTCGCATCTT TACACCGACA
GAACATTGTC GAGTGAAAGG GATACCAGAG GAACTCATCC AAGGTCTGTC GGACACTATT
GCCCACCAGA TTCTCGGGCA ATCGGTAGTC TTTCCCGCGT TCGAGGCTTT AGCCCTCGCA
TTAGGGAACA GCCTGTGGAG CTGGGTTGGA ATGATGCCAA TCATGGTCGA AGTCGTGGAT
GAATCACAGC CGGTGATCGG TGGTGAAGAC TTCCATTGGG CAACGGCATT GGTTGACGCA
AAGGGCACTC TCAAGCTGTC ACCGGCAGCG AAAAAACAGG GGATGCCCTT CAACATTATG
GATGGTCAAT TGGCTGTCTA TTCACCTAAC GGAACTAAAA AGAGCTGCGG CCATGAGCCT
TGCGAATATC TCCCGGTAAT GATGTCCGGA GACGCAATCA TGGTCACTTC ATCTTTGGTT
CATTAG
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| Protein sequence | MATIVNTKLG EHRGKKRVWL EGQKLLREGY YPGMKYDLEL KDSQVVLRVK EEGKFTISKR
ERNGRVSPII DLTVQELATV FDGVEMLRVF IRNGAIVISA HHQQERVIER VNRLISKLEN
GESLSVCSLF HGGGVLDKAI HAGFHKAGIA SAISVAVEME GKYLDSSLAN NPELWNEDSI
VIESPIQAVN LSKRPPQVDV LMGGIPCTGA SKSGRSKNKL EFAESHEAAG AMFFNFLQFV
EALNPAVVLI ENVPEYQNTA SMEVIRSVLS SLGYSLQERI LDGNEFGVIE RRKRLCVVAL
SHGIDGFELE KVQPVRTKES RIQDILEPVP LDSERWKSFD YLAEKELRDK AAGKGFSRQL
LTGDDEFCGT IGKDYAKCRS TEPFIVHPEQ PELSRIFTPT EHCRVKGIPE ELIQGLSDTI
AHQILGQSVV FPAFEALALA LGNSLWSWVG MMPIMVEVVD ESQPVIGGED FHWATALVDA
KGTLKLSPAA KKQGMPFNIM DGQLAVYSPN GTKKSCGHEP CEYLPVMMSG DAIMVTSSLV
H
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