| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1807 |
|---|
| Symbol | |
|---|
| ID | 4927872 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1755746 |
|---|
| End bp | 1756528 |
|---|
| Gene Length | 783 bp |
|---|
| Protein Length | 260 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 33% |
|---|
| IMG OID | 640167329 |
|---|
| Product | putative RNA methylase |
|---|
| Protein accession | YP_001098318 |
|---|
| Protein GI | 134046833 |
|---|
| COG category | [R] General function prediction only |
|---|
| COG ID | [COG4076] Predicted RNA methylase |
|---|
| TIGRFAM ID | [TIGR01444] methyltransferase, FkbM family |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGGAATTAA AATTGTCTGT ACCTCAGTGG CACTACAGCA TGCTTTTAGA TGATGAGCGG
GTTTCAGTAT TTAAAGAAGC AGTCGAAACT TCTGTAAAAT CTGAAGATAT TGTATTTGAT
CTAGGGACTG GAAGCGGGAT TCTTGCAATG ATTGCAGCAA AAAATGCAAA ACACGTTTAT
GCAGTTGAAT TAGACCCAAT AACAACCGAA TATACTAGAG AAAATATCAA AGAAAACGAT
TTTAAAAATA TCACTGTTAT TGAAGATAAT GCAGCTTACT ATCCATTTTC AGAAAAAGCA
GACCTTGTAA TTGCAGAACT TCTCGATACA GGATTGATCA CCGAGCCACA AGTTCCTGTT
TTAAATTCAA TAATTGAAAA AGGGCTTTTA AAAAAAGGGG GAATTATTAT CCCTGAAGAA
GTTTACAACT CTGCACAGCT CGTTAAATCA AAAATGGGTC ACATTTACTA TGACGAAGAA
GTAACTTCAG AAGAAGTTTC AAACGAGACT GTTTACGATA CAATTAATTT TTATCAGGTA
AATGATGAAG ATGTCGAATA TTTACTCGAA TTTGATTTAA ATGAAGACGT AAAAAATCCT
GCTGTGAGAT TGAACACGTA TACTAAATTA AAAACTGATC TAATTTCAGG TTCAAGTCCA
ATGTTAAATC CACCACTTGT AATTCCAATA AATGGTGAAC TAAAAGCAGG TACTGTTAAA
ATAAAATTAT CTTACATAAT GGGCGGAGAT TTGGAGTCCA TAGACGTTCA AATTATAAAA
TAG
|
|---|
| Protein sequence | MELKLSVPQW HYSMLLDDER VSVFKEAVET SVKSEDIVFD LGTGSGILAM IAAKNAKHVY
AVELDPITTE YTRENIKEND FKNITVIEDN AAYYPFSEKA DLVIAELLDT GLITEPQVPV
LNSIIEKGLL KKGGIIIPEE VYNSAQLVKS KMGHIYYDEE VTSEEVSNET VYDTINFYQV
NDEDVEYLLE FDLNEDVKNP AVRLNTYTKL KTDLISGSSP MLNPPLVIPI NGELKAGTVK
IKLSYIMGGD LESIDVQIIK
|
|---|
| |