Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1764 |
Symbol | |
ID | 4927952 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1715462 |
End bp | 1716313 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 33% |
IMG OID | 640167286 |
Product | hypothetical protein |
Protein accession | YP_001098275 |
Protein GI | 134046790 |
COG category | [S] Function unknown |
COG ID | [COG4022] Uncharacterized protein conserved in archaea |
TIGRFAM ID | [TIGR03275] putative methanogenesis marker protein 8 |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGAATGAAG ATATCCACAT AATGGAAGTT CTCGGAAATG CTAAAGTTAC CGTAAAAAAT GGGAAAGTTG TCGATGTTAG CGATCCCATA CTATCATTTT GTCCTCTTTT TGCAAAACAT CGGGGAATTA AAGAAATTAA CAAAGAATCA ATCCAGAAAA ACGTTGAATT TCGGATTGAA AGTTTTGGGT TATTTACAAA AGATAGAGTT GTTTTAGATG ATTCTCCTTT TGTTGGTTTT GGAACTTCCG AAATTTTCAT GAGCGCTTTA AATAAAGGAT TTTTAGATGC AGTTGTTGTT GTAAGCGACT GTGCTGGAAC TGTTGTTACA AATAATCCAA AACTCGTTCA GGGATTATGT GGAAGAATTT CAGGAATTGT CAAAACTACT CCTGTAAAGG AAGTAATCGA AAAAATTGAG AAAGCTAAAG GAATAGTTCT TTCAAAAGAA GATGCTTCAA TTGACCAGAT AAAAGGAGTA AAACTTGCAA TTGAACTCGG ATACAAAAAA ATCGGAGTTT CTGTTTCAAA TTTAAAAGAT GCTTTTGAAA TAAAAAAATT GGAAAAGAAC GATGTAAAAA TTATAACTTT TGGAGTTCAT ACAACAGGAA TTGGCCTTTC GGATTATGAC GAATACCTCC AGTATATTGA TTTAATTTCA GCATGCGCTT CTAAAAATCT GTTGAAATCA AAATCACTCT ATATAAAAGC TCAAGCTGGA AGCGGAGTTC CAATATTTGC GCTTTCAAAT TCTGGGAAAG AACTTTTATT TGAACGATTA AAAGAAATTG ACAAGCCTAT TTTGATAACT ACAAATGAAT CACTACCTTA CTTTACAGAA CCCCCTCAAT AA
|
Protein sequence | MNEDIHIMEV LGNAKVTVKN GKVVDVSDPI LSFCPLFAKH RGIKEINKES IQKNVEFRIE SFGLFTKDRV VLDDSPFVGF GTSEIFMSAL NKGFLDAVVV VSDCAGTVVT NNPKLVQGLC GRISGIVKTT PVKEVIEKIE KAKGIVLSKE DASIDQIKGV KLAIELGYKK IGVSVSNLKD AFEIKKLEKN DVKIITFGVH TTGIGLSDYD EYLQYIDLIS ACASKNLLKS KSLYIKAQAG SGVPIFALSN SGKELLFERL KEIDKPILIT TNESLPYFTE PPQ
|
| |