Gene MmarC5_1742 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1742 
Symbol 
ID4927997 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1690075 
End bp1691043 
Gene Length969 bp 
Protein Length322 aa 
Translation table11 
GC content39% 
IMG OID640167258 
Productflagellin 
Protein accessionYP_001098253 
Protein GI134046768 
COG category[N] Cell motility 
COG ID[COG1681] Archaeal flagellins 
TIGRFAM ID[TIGR02537] archaeal flagellin N-terminal-like domain 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAGTACT TTATTCATGA TAAAAAAGGT GCTTCTGGAA TTGGAACCTT GATTGTCTTT 
ATTGCAATGG TATTAGTTGC GGCAGTTGCA GCAAGCGTTT TAATTAACAC TAGCGGATTC
TTGCAACAAA AAGCTTCAAC GGTCGGTAAA GAAAGCACGG ATCAAGTTGC AAGTGGTATT
CAGGTATTGA GTGTCACAGG ACACATCTAT ACACTATCTG CCACAAAATA CGGCCTTGAC
AAAATTGCAG TATACATATC ACCCAACTCT GGAAGTGGGC CTATAGATAT TACGCATTGT
ATAGTACAGT TGACCTATGG CGACAGACTC GCAAATATCA ACTATACCCA CAAAGAAAAT
GCTACAATAG GTAATGCAAA CGTATTCTCA CTAGACGATA CGCTTTCATT CAATCACAGT
ATTTCGTCAT ATACGGGAAC CACGATCTAC ACAGATGATG AAGTGGCTGG AGATATTATT
CGAATATCTA CAACAGATCC TGATTTGAGA GCACTTTTAA AAGGATTCTC AAGTGGCGAT
GCAATTACAA TAGTAACAAA CCATACAAAC GCTCCTGGAG GAAACGGTGC AGTTTCTTCA
ATCACTAGAA GCGATTCAAA TTTAACAGTT AACATTTCAA TGACTGCTGG AGCTGCGGTA
ACTGCAGATG GACAGTTATC TGGCCTAGAA TGGTTTAAAA TAAATGGAAC TGCAGATTTG
GCAAAATCAG ATGCTACATC ATTTACAATA ATAGCTTTGC AGGATGAGGA CGATTCAATT
TCAGATTCTG GTGTATTAAA CGGTGGAGAC ATTGGAGCCA TTGTTTTAAA TACTGAAGCA
ATATTTGGAA CTGAAATATT GAATAGGAAA GAAATTTCTG GAAAAATTAT GCCTGAATTT
GGTGCTCCAG GAATTATTTC GTTCACGACT CCTCCAACAT ACGTATATGA ACTCGCGGAA
CTGCAATAG
 
Protein sequence
MKYFIHDKKG ASGIGTLIVF IAMVLVAAVA ASVLINTSGF LQQKASTVGK ESTDQVASGI 
QVLSVTGHIY TLSATKYGLD KIAVYISPNS GSGPIDITHC IVQLTYGDRL ANINYTHKEN
ATIGNANVFS LDDTLSFNHS ISSYTGTTIY TDDEVAGDII RISTTDPDLR ALLKGFSSGD
AITIVTNHTN APGGNGAVSS ITRSDSNLTV NISMTAGAAV TADGQLSGLE WFKINGTADL
AKSDATSFTI IALQDEDDSI SDSGVLNGGD IGAIVLNTEA IFGTEILNRK EISGKIMPEF
GAPGIISFTT PPTYVYELAE LQ