| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1731 |
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| Symbol | |
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| ID | 4928017 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 1681173 |
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| End bp | 1682849 |
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| Gene Length | 1677 bp |
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| Protein Length | 558 aa |
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| Translation table | 11 |
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| GC content | 36% |
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| IMG OID | 640167247 |
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| Product | flagellar assembly protein J |
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| Protein accession | YP_001098242 |
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| Protein GI | 134046757 |
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| COG category | [N] Cell motility
[U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG1955] Archaeal flagella assembly protein J |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 0.8602 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTTTTTTG ATATACTTCC AAGAGTCGGA TTAAAACCAA AAGATTACAT TCTTAAATTT
ATACTTCCTG CAACCGCATT GTCAATTTTG TTATTAATTC TAGGGATAAC TTATTTTTCA
GGATACACGA GATTGGTTGT ATTATTCCTT CCACTACTGC TAATGGGTAG TGCAATAGGT
TACCCATATA TTGAACTCGA TTCGCAGCGT CAAAAAATAA ACGAACGACT CCATATATTC
ATTACTAAAT TTGGAGTTCT TTCAATCACT GATTTGGATA GAAAAGAATT AATGAACCTT
TTGGCAACCG AAAAAGAAGA ATTGGGGCAA CTAGCAAATG AATCACATAA AATCTTTGTA
TTGATTAAAA GATGGAATCA GTCACTTGCA GAATCTTGTC GATTTTTAGC AAATCGATCC
CCGAGTAGCC AGTTCGGCGA TTTTTTAGAT CGTATGGCAT ACTCTATCGA CAGTGGTCAG
GACTTAAAAG AGTTTTTAAG TGGGGAACAG GATGTAGTTA TGGAAGACTA CGGTGAATTT
TATAAGCGGG CAATTTACAG CTTGGATACC TTTAAAGAAA TGTACGTAAG CGCTGTGACA
TCCGTATCAT TTTTCGTAAC TTTTGCGATA ATTGCACCAT TTTTACTTCC TTATGACTTC
GTAACAATGG TTACAGTTGC CCTTTTGGGT TTTATATTGA TCGAAGTCAT CCTAGTTTAT
GCAATAAAAA GTAAACTTCC TTATGATCGT TTATGGCATA CGGGGGAAAA ACCAACCAAA
ATAGACCTGA AATTAAAAAA GTGGTTAATA ATATCCATTA TTGGAACTGC AATACTTACT
TTGTTTTTGT TAGGAGGTAA ATTTATCGGG GAAATACCCC AAATAATGAA AATACCTTAC
CAAATACTTT TTGCACTAGG GATGACGCCA CTTGCTGTCG GAGGATACTT TGCACAACGT
GAAGAAAATA TTGTAATTAG GAAGGAATTC AACTTTCCTG ATTTTTTAAG ATCACTAGGG
GATTCTGTTA GCGCAAAAGG TGGAGGTATG ACTGATTCAT TGGAATACTT ATCATCAAAC
GACTTTGGAC CCTTAACGAA AGATTTGGAG GGGCTTTACA AAAGAGTATC AATTAGGGTA
AACAGTCAAA AAGCATGGCG ATACTTCGGA TACGATACAT GTAGCTACAT GATACAGCTG
TTTTCCGAAA TGTTTGAGCG ATGTACCTTT TTAGGGGGAA ATGCAGGTCT TGCTGCCCAT
ATGATTGGAA AAAACTTTCG TAAAATAATT AACTTGAGGA GATCGAAATA TCAAAGTGTT
AGCCAATTCT CCGGAATCAT GTATGGTTTA TCGGGAGGTA TGGCACTTAC ACTCTATGCC
TCAGCAGGGG TTGCAAACAT GGTTAATGGC CTTTATACAA CCCTTGATAT ACCAGATACA
ATGATTTCAC TGGTAAATAT GATAACTCCT GACGATTTCG CACTTATAAC ATATCTAATA
TACGGCGTAC TCGTAATTTA TTCAGTTGTT TCAGGATACT TGATAAAATT AATGGATGGT
GGGCATTATC AGGTTTCACT TATGCATTTT GTGATAATGC TCTGGATTGC ATCGATTGTA
GGATATGTTA CTGAAGTTAC AACCGGAAGC CTTCTTGGAA CGAGTCTTCC AATTTAA
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| Protein sequence | MFFDILPRVG LKPKDYILKF ILPATALSIL LLILGITYFS GYTRLVVLFL PLLLMGSAIG
YPYIELDSQR QKINERLHIF ITKFGVLSIT DLDRKELMNL LATEKEELGQ LANESHKIFV
LIKRWNQSLA ESCRFLANRS PSSQFGDFLD RMAYSIDSGQ DLKEFLSGEQ DVVMEDYGEF
YKRAIYSLDT FKEMYVSAVT SVSFFVTFAI IAPFLLPYDF VTMVTVALLG FILIEVILVY
AIKSKLPYDR LWHTGEKPTK IDLKLKKWLI ISIIGTAILT LFLLGGKFIG EIPQIMKIPY
QILFALGMTP LAVGGYFAQR EENIVIRKEF NFPDFLRSLG DSVSAKGGGM TDSLEYLSSN
DFGPLTKDLE GLYKRVSIRV NSQKAWRYFG YDTCSYMIQL FSEMFERCTF LGGNAGLAAH
MIGKNFRKII NLRRSKYQSV SQFSGIMYGL SGGMALTLYA SAGVANMVNG LYTTLDIPDT
MISLVNMITP DDFALITYLI YGVLVIYSVV SGYLIKLMDG GHYQVSLMHF VIMLWIASIV
GYVTEVTTGS LLGTSLPI
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