Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1600 |
Symbol | |
ID | 4928376 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1543506 |
End bp | 1544234 |
Gene Length | 729 bp |
Protein Length | 242 aa |
Translation table | 11 |
GC content | 36% |
IMG OID | 640167104 |
Product | radical SAM domain-containing protein |
Protein accession | YP_001098111 |
Protein GI | 134046626 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0602] Organic radical activating enzymes |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGATTAGAG AAGTATTCTC CTCAATTATG GGTGAAGGGA AGTTTATCGG CAAGAGATTC ATTTTTGTGA GATTTAAGGA ATGCCCACTT GACTGCATAT ATTGTGACGA GCCAAATGCT CCGGGTGGAA CTGCAAGAGT CGAAGAAGTT TCCGGATCAG GCGACTTTAT GGAATATCTG GAACTTGAAC ACGAACTTAT TGATATCATC GAAAAATTGA GAACTCCTGA TCTTTTTGCA GTTTCGTTTA CTGGAGGGGA ACCCCTATTA TATTCAAATA AAATAAAACA GTATTCCGAA ATTTTAAAGC ATAAAGGTTA TAAAACATTT TTAGAGAGTA ACGGAATGTT TCCAGAAAGA TTGGATAGCT ACGATTACGC TTCAATCGAT ATAAAATTGC CAGAACACTT TGAAAATAAA GAGGACGAGT TCTGGTATGA TTTGTATTCA AAAGAACTTG AAACAATCGA AAGACTTTAC TTGGCAGGAA CTGACGTTTA CGCAAAAATT GTAGTGTTTG AAGAAACTTC CGAAGAATTA ATCGAAAGAA TTGCAAGAGA TTTATCAAAA ATAGGAAATA TAACGCTCTG CATTCAGCCG GTTTCTCCAA CTGACAAAAT AAAGGCAACG ACTTCAAAGA AAAAGTTATT TGAATTAATG GCAATTTGCG GAAGATACGT GGATGTAATG TGCACGCCGC AAATCCACAA ATGGATGGGG ATGCTTTAA
|
Protein sequence | MIREVFSSIM GEGKFIGKRF IFVRFKECPL DCIYCDEPNA PGGTARVEEV SGSGDFMEYL ELEHELIDII EKLRTPDLFA VSFTGGEPLL YSNKIKQYSE ILKHKGYKTF LESNGMFPER LDSYDYASID IKLPEHFENK EDEFWYDLYS KELETIERLY LAGTDVYAKI VVFEETSEEL IERIARDLSK IGNITLCIQP VSPTDKIKAT TSKKKLFELM AICGRYVDVM CTPQIHKWMG ML
|
| |