| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1598 |
|---|
| Symbol | |
|---|
| ID | 4928185 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 1541508 |
|---|
| End bp | 1542599 |
|---|
| Gene Length | 1092 bp |
|---|
| Protein Length | 363 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 39% |
|---|
| IMG OID | 640167102 |
|---|
| Product | glutamate synthase (NADPH) GltB1 subunit |
|---|
| Protein accession | YP_001098109 |
|---|
| Protein GI | 134046624 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0067] Glutamate synthase domain 1 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGCGGAA TTATCGGATT TATGAGTAGA ACTGGAAGAC TTATCAGTGG AGACAGGATT
GCTACAGCCT TGAATTGTTT AAAGGAAAGA GGAAACGGTG AAGGTTCAGG GTATGTGGGA
TATGGAATTT ATCCTGACTA TAAGGATGAC TATGCAATAC ATGTTTTTTT AGATGCAACC
AAAGATTACG ACAGAATAAG ACACGAAGTC GAAGAAGTTC TTGTGAAATA CGGCTACATC
TTAAAAGACG AAGAAATTCC AACGGAAGAA GGAATTATCA AACAAGAACA GGTCTCATGG
AGATTTTTCT ACAGGTTTGA TGAAAAATAC AAAACTGTCG AAGAAGATTT AATGGTGGAT
ATCGTAATGG ATATCAACGC TAAAATCGAC GGAGCATTTG TATTTTCAAG CGGTAAAAAC
ATGGGCGTAT TTAAAGCTGC TGCATGGCCA TTAGAGGTCG CAGAATACTT TAAAATTGAC
CAGTACAAAG GTTTCCAGTG GCTTTCACAT GCAAGATACC CTACAAACAC GAAAGGATGG
TGGGGAGGCG CGCACCCATT CAACCTATTG GGATGGTCTG TAGTTCACAA CGGAGAAATT
ACAAGCTACG GGGCAAACAA AAGATACGTT GAAAGTTTCG GATATAAATG TAAACTTTTA
ACCGACACAG AAGTTGTAGC ATATCTCTTC GATTTACTCA TCAGGAAACA CAAAATCCCT
GTAGAATATG CAATGAGTGC ATTAGCTCCA AGATTCTGGG ACGAAATCGA GATTATGTCA
GAAGAAGATA AAAAGATTCA TGAAGCAATC CGTATGACCT ACGGCGGTGC AACAATGAAC
GGTCCTTTCG GAATTGTTGT AGGGACACAA GAAGGAATGG TGTTCATGAA CGGCGAAGTC
GAAGAAGGAA ATACAATGGT TGGTTTGACT GACAGAATTA AATTAAGACC ATTAGTTGCG
GCAGAAAAAG ATGACTTGTT ATTTGTATCA AGTGAAGAAT CAGCAATTAG GAAAATATGT
CCTGAATTGG ATCGAGTATG GATGCCAGAT GCAGGAAGAA TGGTTATCGC AAAATTGGAG
AAAAAAATTT AA
|
|---|
| Protein sequence | MCGIIGFMSR TGRLISGDRI ATALNCLKER GNGEGSGYVG YGIYPDYKDD YAIHVFLDAT
KDYDRIRHEV EEVLVKYGYI LKDEEIPTEE GIIKQEQVSW RFFYRFDEKY KTVEEDLMVD
IVMDINAKID GAFVFSSGKN MGVFKAAAWP LEVAEYFKID QYKGFQWLSH ARYPTNTKGW
WGGAHPFNLL GWSVVHNGEI TSYGANKRYV ESFGYKCKLL TDTEVVAYLF DLLIRKHKIP
VEYAMSALAP RFWDEIEIMS EEDKKIHEAI RMTYGGATMN GPFGIVVGTQ EGMVFMNGEV
EEGNTMVGLT DRIKLRPLVA AEKDDLLFVS SEESAIRKIC PELDRVWMPD AGRMVIAKLE
KKI
|
|---|
| |