Gene MmarC5_1345 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1345 
Symbol 
ID4927779 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1289821 
End bp1290627 
Gene Length807 bp 
Protein Length268 aa 
Translation table11 
GC content33% 
IMG OID640166841 
Producthypothetical protein 
Protein accessionYP_001097857 
Protein GI134046372 
COG category[S] Function unknown 
COG ID[COG1967] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones23 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAATGAGA TGCTCTTAAT TAGGGAATTT ATATACCGGT ACTACATTTA CCCGATAGAT 
ACCAAACAGG GTTATAATTT AATTCAGGAA ATTACTTACG GAATTTTACT CTTTGTAATG
GTTTATACAT TTTATCGGGT TTGTTTAAAA CTTAAAATAG CAATTGACCG CAGATTTGCA
GAAGTTACCG TATTTTACGT GATTTTAATA ACATTAATGA GGGCATTGGT TGATGCAGGA
CTGTTTCCAA GACTGTATTA CACAGTTACG CCAGGAATAG TTGTTACAAT TGGTATTTAC
TACATGCTTT CAATAATTAT TTCAGGAATA CTTCTAAAAA AGAAATATTA TCTACTTTCA
ATAGCAATGG CAGTAGTACC AGTTCTGTAC ATGCTTTTCG AGTTTTCGAG TAGAATAACT
CATCCGGAAG CTATTGTGTA TGTTTTTGGA ATTTTGACTG CAAGTTACTA TGCACTAATA
TATATTGTTG AAAAGCTAAG TAAAGTAAAA ATTGAGCGAA TAGATAAATA TGCAATATTT
TCACAGCTCG TAGATGCATC TGCAACATCT GTTGGAATTG GAGTGTTTGG TTACTGGGAA
CAGCACCCTG TTCCAAGACT TTTCATGGAT TATCTGGGGC CCTACAGTAT AATACCATTA
AAAATGCTTG TAGTACTCTT TGTTTTGGAT ATATTCAACA AAGAAGTTAA GGATGATAAT
TTAAGGAACA TTTTGAAAAT AACTGTAATG GCTCTTGGAC TTGCGCCAGG TCTTCGAAAC
TTATTTAGGA CAGTTATGGG AGTCTAA
 
Protein sequence
MNEMLLIREF IYRYYIYPID TKQGYNLIQE ITYGILLFVM VYTFYRVCLK LKIAIDRRFA 
EVTVFYVILI TLMRALVDAG LFPRLYYTVT PGIVVTIGIY YMLSIIISGI LLKKKYYLLS
IAMAVVPVLY MLFEFSSRIT HPEAIVYVFG ILTASYYALI YIVEKLSKVK IERIDKYAIF
SQLVDASATS VGIGVFGYWE QHPVPRLFMD YLGPYSIIPL KMLVVLFVLD IFNKEVKDDN
LRNILKITVM ALGLAPGLRN LFRTVMGV