| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1148 |
|---|
| Symbol | |
|---|
| ID | 4928319 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 1089200 |
|---|
| End bp | 1089709 |
|---|
| Gene Length | 510 bp |
|---|
| Protein Length | 169 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 29% |
|---|
| IMG OID | 640166640 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001097662 |
|---|
| Protein GI | 134046177 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4066] Uncharacterized protein conserved in archaea |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 19 |
|---|
| Plasmid unclonability p-value | 0.165275 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGATAGTTA TGAACTCAAA AGAATTATTT AAAAATTTAA AGGAAAAAGC AAGAGATTAC
CCAGTATCCG ACCTAATAAA AGTAAAATAC TATTTTGATC GAGAAATGAA AATAGTTTTA
AAAAAATACC GTGAAAATTT TGTTTATAGT TACTTTGGGC TATTTTATGA AACACTCATG
GAAATAAAAA ATAAATCCGA ATCTGAAATT CCAACATTTG ATCTGGACGA AGTCGAAATT
CAAAAACTAA ACGAAAGAAT TGATTTTGTA TCGTTAGAAC TTAAAACTGA AAAGGGACGT
GAAGAAATTA TAACTCTTGA GAAAATAGTG TATCCATACC TTGTATTTAT TTCTAAAAAG
CCACTTCACC ACCTTAGTTT AAGATTTCCA GGTGGGAATA CAATTATTGA AAAAAAAGGA
ATTTATTTTT GCCCAATTCG GGATGCTCAG GAAAATGATC TCGGAATATG TGAATTTTGC
TGTTGTAAGG ATTATACTGA TTTATATTGA
|
|---|
| Protein sequence | MIVMNSKELF KNLKEKARDY PVSDLIKVKY YFDREMKIVL KKYRENFVYS YFGLFYETLM
EIKNKSESEI PTFDLDEVEI QKLNERIDFV SLELKTEKGR EEIITLEKIV YPYLVFISKK
PLHHLSLRFP GGNTIIEKKG IYFCPIRDAQ ENDLGICEFC CCKDYTDLY
|
|---|
| |