Gene MmarC5_1080 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1080 
Symbol 
ID4927588 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand- 
Start bp1035123 
End bp1035746 
Gene Length624 bp 
Protein Length207 aa 
Translation table11 
GC content29% 
IMG OID640166574 
Producthypothetical protein 
Protein accessionYP_001097597 
Protein GI134046111 
COG category[S] Function unknown 
COG ID[COG2512] Uncharacterized membrane-associated protein/domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value1 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAGTTCAA AAGTTAAAAT AGCCGTATAT ATGCTGATAT TTATCGTTTC AGTAATTGTG 
CTAACTTCTA AATTTTTATA TCCACCGACA GTTCAGGTAA TCGTTCAAGG GGATACCACG 
TATGTTCAGG AAGTTCCTAA TGTGTACACG CTTTATGATT GTATGTTAAT GGTTTTGGCA 
TCCTTTTCGC TTTGCTTAAG TACTACTCTA ATTTACTTTA CAGTTCGTGA TTTAGAGCTT 
TCGGAGAAAA ATAATGTTAA TAAGATAGAT TTAAGTGATT TAAACGACCA TATTGGAAAA 
ATTGTATCTT CAAAGGTCAA TGATAAAATT AAAAATGGAA ATACGAATGA AATTCAAAAT 
TTAAACATGG AATCTGAAGT AAAAACCTCT GAAAACGAAG AAAAATTAAG AAACGAGAAT 
TTTATTAAAA TTTTAAAAGG AAACGAAAAA ACTATAGTAA AAATTTTAAT GGATCATGGG 
GAAATGACTC AGAGTGAACT TTTTGAAAGA ACAAAAATTC CAAAATCGAC TCTTTCCAGA 
ACTTTAAGTG ATTTAGAACT TAGGGGAATA ATTTTAAGAT ATGAACACGG AATAAGCAAG 
AAAGTAAAAT TAAATAAATT TTAA
 
Protein sequence
MSSKVKIAVY MLIFIVSVIV LTSKFLYPPT VQVIVQGDTT YVQEVPNVYT LYDCMLMVLA 
SFSLCLSTTL IYFTVRDLEL SEKNNVNKID LSDLNDHIGK IVSSKVNDKI KNGNTNEIQN 
LNMESEVKTS ENEEKLRNEN FIKILKGNEK TIVKILMDHG EMTQSELFER TKIPKSTLSR 
TLSDLELRGI ILRYEHGISK KVKLNKF