Gene MmarC5_1060 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_1060 
Symbol 
ID4927650 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp1016982 
End bp1018277 
Gene Length1296 bp 
Protein Length431 aa 
Translation table11 
GC content31% 
IMG OID640166555 
Productphosphoesterase domain-containing protein 
Protein accessionYP_001097578 
Protein GI134046092 
COG category[L] Replication, recombination and repair 
COG ID[COG0608] Single-stranded DNA-specific exonuclease 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGATATAA TGCCTATTGA AGATATTTTT AAATTTAATC AAATTACTGG AAAAATAAAA 
GAAAAACTAG AAACTTATAA TGGATTAATA AGAATTGTAA CACACCACGA TCCTGATGGA
CTTACATCTG GTTCAATTGT GCTTAAAACA CTTATCAGGT TAAATAAAAA TGCACAAATG
ACTATTTTGG AGCATTTATC AAAAGAATCT ATTGAAGATC TCGCAAAAGA AAACGATAAA
ATGTTTATAT TTTGCGATAT GGGAAGCGGT CAGATTGAAT TGATAAATAA TCTTGGATTT
AATGCAATAA TTCTTGATCA CCACCCTCCA AAAGTGGCCG AAACTGAAAT TGGAAATATT
TTACAGTTAA ATCCACACAT TTTTGGGGCA AATGGTGCAA AAGAGATTTC TGCAAGTGGA
GTATGTTATT TAATTGCAAG ATTATTTGGA TATTATGATT TAGCACCTAT TGCAATTGTT
GGGGCAATTG GGGACATGCA ACACTTGCCA TTTATTGGAT TGAATAAATA TATCTTAAAT
GAAGCAAGGA AGAACCGTTA TTTGAGCGTT ATAAAAGATA TTGTTTACAA TTGCTACAAT
TTACCAATTT CAAAGTCGAT ATGTTATTCA ACTCAACCGT ATATCAGAGA ATTAAGTAGT
ATCGATAAAA TAAAAGAGAT TTTTGATGAA TTAAAAATAA ATCCTGAAAA AAAAGGAATA
ACTGCAAAAG AAGCAGAAAA TTTGCTCGAA TATTTTGAAA AATTTAACAA AAATGACGAG
TTAATGGTTG ATAGATACGA AATAAATCAT AAAATAAACG ATGCGTTTTA CCTATCAGAA
GTTTTGAATG CATGTGGCAG AAAAGAGATG ACTGCAGTCG GAATTGGAAT TTTGCTTGGA
GATGATGAAT GCATCAAACA CGGCGAGAAA TTATACATTG AATACAAGGA AGAATTAATT
GAAGAATTAA AAAACGTAAA ATTAAATTCT ATGGATAATA TCGAATATTT TATCGGTGAA
AAAGGAAAAA CCGGAATAAT TGCCGCATTA ATGGTAAAAG ATAAGCCAGT ACTAGGATTT
AACGAGCAAA GCGAAATTTA TAAGGTTTCT TCAAGAGGAA ACAAGGAACT CGTTGAATGG
GGACTAAATC TTTCAGAAGC AATGGCTGCA TCAAAAGAAT TTGGTGGAGA TGGTGGTGGA
CACAATATCG CATCTGGTGC AGCCCTCCAA AAGAATTATT TAAATGAATT TTTGGAAAAG
GTCAATGAAA TTGTTGGTAA ACAGTTGAAA AAGTAA
 
Protein sequence
MDIMPIEDIF KFNQITGKIK EKLETYNGLI RIVTHHDPDG LTSGSIVLKT LIRLNKNAQM 
TILEHLSKES IEDLAKENDK MFIFCDMGSG QIELINNLGF NAIILDHHPP KVAETEIGNI
LQLNPHIFGA NGAKEISASG VCYLIARLFG YYDLAPIAIV GAIGDMQHLP FIGLNKYILN
EARKNRYLSV IKDIVYNCYN LPISKSICYS TQPYIRELSS IDKIKEIFDE LKINPEKKGI
TAKEAENLLE YFEKFNKNDE LMVDRYEINH KINDAFYLSE VLNACGRKEM TAVGIGILLG
DDECIKHGEK LYIEYKEELI EELKNVKLNS MDNIEYFIGE KGKTGIIAAL MVKDKPVLGF
NEQSEIYKVS SRGNKELVEW GLNLSEAMAA SKEFGGDGGG HNIASGAALQ KNYLNEFLEK
VNEIVGKQLK K