Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_1060 |
Symbol | |
ID | 4927650 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 1016982 |
End bp | 1018277 |
Gene Length | 1296 bp |
Protein Length | 431 aa |
Translation table | 11 |
GC content | 31% |
IMG OID | 640166555 |
Product | phosphoesterase domain-containing protein |
Protein accession | YP_001097578 |
Protein GI | 134046092 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 22 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATATAA TGCCTATTGA AGATATTTTT AAATTTAATC AAATTACTGG AAAAATAAAA GAAAAACTAG AAACTTATAA TGGATTAATA AGAATTGTAA CACACCACGA TCCTGATGGA CTTACATCTG GTTCAATTGT GCTTAAAACA CTTATCAGGT TAAATAAAAA TGCACAAATG ACTATTTTGG AGCATTTATC AAAAGAATCT ATTGAAGATC TCGCAAAAGA AAACGATAAA ATGTTTATAT TTTGCGATAT GGGAAGCGGT CAGATTGAAT TGATAAATAA TCTTGGATTT AATGCAATAA TTCTTGATCA CCACCCTCCA AAAGTGGCCG AAACTGAAAT TGGAAATATT TTACAGTTAA ATCCACACAT TTTTGGGGCA AATGGTGCAA AAGAGATTTC TGCAAGTGGA GTATGTTATT TAATTGCAAG ATTATTTGGA TATTATGATT TAGCACCTAT TGCAATTGTT GGGGCAATTG GGGACATGCA ACACTTGCCA TTTATTGGAT TGAATAAATA TATCTTAAAT GAAGCAAGGA AGAACCGTTA TTTGAGCGTT ATAAAAGATA TTGTTTACAA TTGCTACAAT TTACCAATTT CAAAGTCGAT ATGTTATTCA ACTCAACCGT ATATCAGAGA ATTAAGTAGT ATCGATAAAA TAAAAGAGAT TTTTGATGAA TTAAAAATAA ATCCTGAAAA AAAAGGAATA ACTGCAAAAG AAGCAGAAAA TTTGCTCGAA TATTTTGAAA AATTTAACAA AAATGACGAG TTAATGGTTG ATAGATACGA AATAAATCAT AAAATAAACG ATGCGTTTTA CCTATCAGAA GTTTTGAATG CATGTGGCAG AAAAGAGATG ACTGCAGTCG GAATTGGAAT TTTGCTTGGA GATGATGAAT GCATCAAACA CGGCGAGAAA TTATACATTG AATACAAGGA AGAATTAATT GAAGAATTAA AAAACGTAAA ATTAAATTCT ATGGATAATA TCGAATATTT TATCGGTGAA AAAGGAAAAA CCGGAATAAT TGCCGCATTA ATGGTAAAAG ATAAGCCAGT ACTAGGATTT AACGAGCAAA GCGAAATTTA TAAGGTTTCT TCAAGAGGAA ACAAGGAACT CGTTGAATGG GGACTAAATC TTTCAGAAGC AATGGCTGCA TCAAAAGAAT TTGGTGGAGA TGGTGGTGGA CACAATATCG CATCTGGTGC AGCCCTCCAA AAGAATTATT TAAATGAATT TTTGGAAAAG GTCAATGAAA TTGTTGGTAA ACAGTTGAAA AAGTAA
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Protein sequence | MDIMPIEDIF KFNQITGKIK EKLETYNGLI RIVTHHDPDG LTSGSIVLKT LIRLNKNAQM TILEHLSKES IEDLAKENDK MFIFCDMGSG QIELINNLGF NAIILDHHPP KVAETEIGNI LQLNPHIFGA NGAKEISASG VCYLIARLFG YYDLAPIAIV GAIGDMQHLP FIGLNKYILN EARKNRYLSV IKDIVYNCYN LPISKSICYS TQPYIRELSS IDKIKEIFDE LKINPEKKGI TAKEAENLLE YFEKFNKNDE LMVDRYEINH KINDAFYLSE VLNACGRKEM TAVGIGILLG DDECIKHGEK LYIEYKEELI EELKNVKLNS MDNIEYFIGE KGKTGIIAAL MVKDKPVLGF NEQSEIYKVS SRGNKELVEW GLNLSEAMAA SKEFGGDGGG HNIASGAALQ KNYLNEFLEK VNEIVGKQLK K
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