| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_1001 |
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| Symbol | |
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| ID | 4928140 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | - |
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| Start bp | 969682 |
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| End bp | 970236 |
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| Gene Length | 555 bp |
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| Protein Length | 184 aa |
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| Translation table | 11 |
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| GC content | 35% |
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| IMG OID | 640166499 |
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| Product | putative RNA-processing protein |
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| Protein accession | YP_001097522 |
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| Protein GI | 134046036 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1094] Predicted RNA-binding protein (contains KH domains) |
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| TIGRFAM ID | [TIGR03665] arCOG04150 universal archaeal KH domain protein |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 0.52348 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGTATGAGA ATGTGGAAGT AGTGAAGATT CCAAAAGAGA GAACAGGTAT CCTTATTGGA
ACTCACGGAG AAGTTAGAAA AACACTTGAA AGTGAGCTTG GGGTTGAATT GGAAATCGAT
TCCGAAGGGG AAGTTAATAT TTATTCAACA GAAGGCCAGG AAGACCCATT AGCCCTATGG
AAAGCAAGAG ATATTGTAAA AGCTATTGGA AGGGGATTTA ATCCCGAAAA AGCTTTAAAA
CTGGTTTCAG ATGAATATGC TTTTGAAGTA ATCGATATTT CAGAATATGG AAATTCTGAT
AAAGCTCTTC AAAGATTAAA AGGAAGAATT ATCGGAAGCA GTGGAAAATC AAGAAGATAC
ATTGAAGAAT TAACTTCAAC GCACATTTCA GTTTATGGAA AAACCGTTTC AATTATCGGA
GAAATCGAAA CTGCAAAAAT TGCAAAAGAT GCAATCGAGA TGCTTTTAAG AGGAACGTCG
CACTCAAAAA TGTACAAATT TTTAGAAAGA CACAGACAAG ATGTCAAAAG AAGTGAACTT
AGACTCTGGA AATAA
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| Protein sequence | MYENVEVVKI PKERTGILIG THGEVRKTLE SELGVELEID SEGEVNIYST EGQEDPLALW
KARDIVKAIG RGFNPEKALK LVSDEYAFEV IDISEYGNSD KALQRLKGRI IGSSGKSRRY
IEELTSTHIS VYGKTVSIIG EIETAKIAKD AIEMLLRGTS HSKMYKFLER HRQDVKRSEL
RLWK
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