Gene MmarC5_0884 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0884 
Symbol 
ID4928369 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp865648 
End bp866586 
Gene Length939 bp 
Protein Length312 aa 
Translation table11 
GC content33% 
IMG OID640166383 
Producthypothetical protein 
Protein accessionYP_001097406 
Protein GI134045920 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG2247] Putative cell wall-binding domain 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.172772 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGGACATTT TTAAGAAATT AGCACTATTA ATGATCGTAT TAATGCCAGT TTCATTTGCA 
AGCGACGTTA TATTGGTTAG CGACAATTTT GCAGATAAAC TTGTAGCTCA AACTATTGCC
GATGAACTCG ATGGATTCGT ACTTATTGAG TCACCATGGG GAAATTTCAG CAATGATACA
TTAAATGAAA TATTAAATCA AACTCCCAAA AATGTAGTAA TAATTGGTGG GCTGGTAGCA
GTTCCTGAAA ATTATACCGA TGCACTAGAA AATGAAAATA TTACTGTTGA AAGAATCAAC
GGTTCCGATA GATATGAAAC AAACAACTTA ACAATAAACC GGTTTAAAGA CCTATTTGTT
AACAAAACAA TTTTAATCGT TTATACTGAA GGCGAAAACG ACACATATGG AAATATCACA
AACGTAACCT TCGTATTAAC CGATGGTGAA AACATATCAG TTAGTGAAGA AGATATGCAA
AAAATGTCTG ACAACATTAC TGTTTTAGAA GATGCTGCAT ACAACTACAG CGGACTTTTA
AAAAGACTTC AAAACCATGG ATTCCAAGTA AGTACTGCTT CGATGCCTGG AAATGTTTTA
AAAGCAAAAA TCGAAAGAAG AATGAATACT ATTCAGACGA CGCTTCAAGC GTTAGAACAG
AATGGAATCA ATATCTCAGA AATTGATACA AAATATGGTG CATTGAATGA AGCATACAAT
GGCGGAAATT ACAATTATGC ATACGCTCTT GCAATCCAAT TGGAAGACGA TTTAAAAGCT
AAACAGTACA AAACTACAGG CAATACAAAA ATCGAAAAAA CCGTTAAAGT GAAAACAAAT
AACGTTAAAC CTTCGAATGA TGATTCTGAT GACGACGAAG AAGAAATAGA ATATGAAAAT
GAAACTGAAG AAGATGATAT CAACGAAACT TCAGAATAA
 
Protein sequence
MDIFKKLALL MIVLMPVSFA SDVILVSDNF ADKLVAQTIA DELDGFVLIE SPWGNFSNDT 
LNEILNQTPK NVVIIGGLVA VPENYTDALE NENITVERIN GSDRYETNNL TINRFKDLFV
NKTILIVYTE GENDTYGNIT NVTFVLTDGE NISVSEEDMQ KMSDNITVLE DAAYNYSGLL
KRLQNHGFQV STASMPGNVL KAKIERRMNT IQTTLQALEQ NGINISEIDT KYGALNEAYN
GGNYNYAYAL AIQLEDDLKA KQYKTTGNTK IEKTVKVKTN NVKPSNDDSD DDEEEIEYEN
ETEEDDINET SE