| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0633 |
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| Symbol | |
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| ID | 4928466 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Methanococcus maripaludis C5 |
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| Kingdom | Archaea |
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| Replicon accession | NC_009135 |
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| Strand | + |
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| Start bp | 601100 |
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| End bp | 602101 |
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| Gene Length | 1002 bp |
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| Protein Length | 333 aa |
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| Translation table | 11 |
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| GC content | 31% |
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| IMG OID | 640166135 |
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| Product | phage integrase family protein |
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| Protein accession | YP_001097160 |
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| Protein GI | 134045674 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG4974] Site-specific recombinase XerD |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 17 |
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| Plasmid unclonability p-value | 0.191689 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGAGCAGAA GGAAATTTGA TCTCAAAGGA CAATTATCTG ACCAAAAAAC TAAAATTGAA
TCACCAAAAC GATTAGAAGA ACATAATCCA TATCTTATTA AATTTATCGA AGAAAGAGAA
TTTGATAAAA TTAAAGAAAG TACTATTAAA GAAGATGTAT TACGACTTAG AATCTTTTTG
TCGTTTTGTG ATGATATTGG AAAAATTCCC GAAACTATGG ATTATCACGA ATTTAAACGT
TTTTTCGTGT ATTTAGAAAA AAAAAGAGGA TGCACTCATC AAACACTAGT TCGATACTAT
AATTTATTAA AAGTATTTTA TAGGCTATTT AAATTCACAG CATTTAATGA ATTTAATAAT
GAATGCATCG AGAGAAAGAC TTTTTCAAAA AAATCAAAAA CAAGAAGTTA TGATGATGTA
AATAACGAAA TTATGGATAA GGTGCTTGAT GAAATACTTG ATGGAAACAG CGCTACAAAA
AATCGAGATG GACTTATGAT GCTGGTTTTG TGGGAAACAG GCTGTAGGCG GTCAGAAGTT
ATACGCATAA AATACAATGA TTTTGATTTT AAAACTGGGC AGATAAGATT AACAGATACT
AAAAATGGGG AAGATAGATA TGTTGTAGTT TCAAAAAAGA CCACTAACTT GATAAGAGAG
TACAGTTCAG AAAATATTTT GAAAGGGCCT GAAAATTTTA TTTTTCAAAG TGAAAAAGGT
AAACTTGGAA AACAGGTAAA ACCTGGCCAT CTTTCAGAAG TTTTCAGAAG AGCAATTGAT
AATTTAATTA GTAAAGGGGA AATCGAGGCT GGAAAGAGGT ATGTTCTCCA TTCTTTAAGG
CATGGTAGGG CAGTTGCATT ATTGGATGAG GGTACTTCCG TTGAAATTGT AAAGGAAATT
TTAGGCCATA GTGACGTAAA GACTACGATG ATTTATGCAC ATGCAAAAGA GAGAACAAAA
AAGATGTTAC CAGACATTCG AAAAAAATTA GATCAAAGAT AA
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| Protein sequence | MSRRKFDLKG QLSDQKTKIE SPKRLEEHNP YLIKFIEERE FDKIKESTIK EDVLRLRIFL
SFCDDIGKIP ETMDYHEFKR FFVYLEKKRG CTHQTLVRYY NLLKVFYRLF KFTAFNEFNN
ECIERKTFSK KSKTRSYDDV NNEIMDKVLD EILDGNSATK NRDGLMMLVL WETGCRRSEV
IRIKYNDFDF KTGQIRLTDT KNGEDRYVVV SKKTTNLIRE YSSENILKGP ENFIFQSEKG
KLGKQVKPGH LSEVFRRAID NLISKGEIEA GKRYVLHSLR HGRAVALLDE GTSVEIVKEI
LGHSDVKTTM IYAHAKERTK KMLPDIRKKL DQR
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