Gene MmarC5_0620 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0620 
Symbol 
ID4928745 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand
Start bp591291 
End bp592700 
Gene Length1410 bp 
Protein Length469 aa 
Translation table11 
GC content32% 
IMG OID640166122 
Productputative transcriptional regulator 
Protein accessionYP_001097147 
Protein GI134045661 
COG category[K] Transcription 
COG ID[COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.00572222 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGCAAATTT TAAACGATAT TGAAAAAGGC GAAGGAAAAA CCCTTGAATT TAAGGAACAA 
ATGCCGCAAA ATAACCAGAT TGCAAAAACA GCTGTAGCTT TCTCAAATAC TGCAGGCGGA
AAAATTATCA TGGGAGTTAA AGATGGCTTA AATGAGATAA TTGGTCTAGA TCCGGATGAA
ATCCCTAAAT TAAGGGAATT AATTGTAAAT ACAATTGCGG ATTCATGCGA ACCACAGATA
AGCCCAGAAA TATTCACTCA AAATATTGAT GGAAAAATTA TTTTGATTAT AAGAATTTAT
CCGGGAAGTA AAAAGCCGTA TTTTTTAAAA AAAGAAGGGA TTAACAATGG GACATATCTT
AGAATAGATA ATGTAAATAA AAAGGGTGAT AGTAATGCCG TTAGGCGTTT AATGCTTGAA
GGCGAAAACA TTGCTTATGA TGAAGACATC AATATGGAAT TTAAAATTGA AGAGCTTGAT
TTAAACGCCA TTCTAACACA GCTTGAAAAA TTAACTGGGA AAAAATTTAC CGAAAACGTT
TTAGAAAATT TAAAATTAAT TAAAAGTAAA AATGGTAAAA AATATCCAAC AAACGCCCTT
ATTGCACTTC TTGGATTAAA AAATTATAAA ATACGATGTG CAAGATTCAA AGGAAACGAT
GCTGTTGAAT TTATTGACCA AAAAGAAATT GAAGGAACTA TATTCGAACA GATTATAATG
GCCGAAAAGT TTTTAAAATC ACATCTTAAT CTCTCTGGAA AAATTGAAGG GCTGCAAAGA
AAAGACTCTT ATGAAATCCC ATTTATTGCG TTAAGGGAAG CGTTGATAAA TGCTGTTGTT
CACAGAGATT ATTCAATTTT AGGATCAGAC ATTAAAGTTT CAATTTCTGA CAGCCTTTTA
GAGATAACTT CTCCAGGTTC CCTTCCAAAT ACAATAAATA TTGATAACCT TGGAACAGGA
TGTTCGGAAG TGAGAAATCC CATAATTGCA AGAATATTTA AAGAAACAAA ATTTATTGAG
CAGTGGGGGT CAGGATTTAG AAAAATATTT AATGAATGTG AAAAATACGG GCTTAAAAAG
CCGGAAATTA TTGAAACCTC ATTTTTAAAA GTTAGATTCT ATCGACCGCT TGTTGGTGAC
CGGACGATAG TGGACGATAC TAAACTTGAC CGGACGATAG TGGACGATAC TAAACTTGAC
CGGACGATAG TGGACGATAT GGATGAAAAT CATAAAAAAA TAATATTATA TATCTCCGAA
AATGGTTCTG CTACATCAAC AGAAATAGAA AACTTAATCG ATTTAAAAAG AAGCAGAACT
AGAGAAATTT TAAAAGAAAT GGTCGAAGAA AATATCCTCG AAATGAAAGG GAAAGCTCGA
TCAACGAGAT ATACTTTAAA AAATAATTAA
 
Protein sequence
MQILNDIEKG EGKTLEFKEQ MPQNNQIAKT AVAFSNTAGG KIIMGVKDGL NEIIGLDPDE 
IPKLRELIVN TIADSCEPQI SPEIFTQNID GKIILIIRIY PGSKKPYFLK KEGINNGTYL
RIDNVNKKGD SNAVRRLMLE GENIAYDEDI NMEFKIEELD LNAILTQLEK LTGKKFTENV
LENLKLIKSK NGKKYPTNAL IALLGLKNYK IRCARFKGND AVEFIDQKEI EGTIFEQIIM
AEKFLKSHLN LSGKIEGLQR KDSYEIPFIA LREALINAVV HRDYSILGSD IKVSISDSLL
EITSPGSLPN TINIDNLGTG CSEVRNPIIA RIFKETKFIE QWGSGFRKIF NECEKYGLKK
PEIIETSFLK VRFYRPLVGD RTIVDDTKLD RTIVDDTKLD RTIVDDMDEN HKKIILYISE
NGSATSTEIE NLIDLKRSRT REILKEMVEE NILEMKGKAR STRYTLKNN