Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | MmarC5_0620 |
Symbol | |
ID | 4928745 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Methanococcus maripaludis C5 |
Kingdom | Archaea |
Replicon accession | NC_009135 |
Strand | - |
Start bp | 591291 |
End bp | 592700 |
Gene Length | 1410 bp |
Protein Length | 469 aa |
Translation table | 11 |
GC content | 32% |
IMG OID | 640166122 |
Product | putative transcriptional regulator |
Protein accession | YP_001097147 |
Protein GI | 134045661 |
COG category | [K] Transcription |
COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 9 |
Plasmid unclonability p-value | 0.00572222 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCAAATTT TAAACGATAT TGAAAAAGGC GAAGGAAAAA CCCTTGAATT TAAGGAACAA ATGCCGCAAA ATAACCAGAT TGCAAAAACA GCTGTAGCTT TCTCAAATAC TGCAGGCGGA AAAATTATCA TGGGAGTTAA AGATGGCTTA AATGAGATAA TTGGTCTAGA TCCGGATGAA ATCCCTAAAT TAAGGGAATT AATTGTAAAT ACAATTGCGG ATTCATGCGA ACCACAGATA AGCCCAGAAA TATTCACTCA AAATATTGAT GGAAAAATTA TTTTGATTAT AAGAATTTAT CCGGGAAGTA AAAAGCCGTA TTTTTTAAAA AAAGAAGGGA TTAACAATGG GACATATCTT AGAATAGATA ATGTAAATAA AAAGGGTGAT AGTAATGCCG TTAGGCGTTT AATGCTTGAA GGCGAAAACA TTGCTTATGA TGAAGACATC AATATGGAAT TTAAAATTGA AGAGCTTGAT TTAAACGCCA TTCTAACACA GCTTGAAAAA TTAACTGGGA AAAAATTTAC CGAAAACGTT TTAGAAAATT TAAAATTAAT TAAAAGTAAA AATGGTAAAA AATATCCAAC AAACGCCCTT ATTGCACTTC TTGGATTAAA AAATTATAAA ATACGATGTG CAAGATTCAA AGGAAACGAT GCTGTTGAAT TTATTGACCA AAAAGAAATT GAAGGAACTA TATTCGAACA GATTATAATG GCCGAAAAGT TTTTAAAATC ACATCTTAAT CTCTCTGGAA AAATTGAAGG GCTGCAAAGA AAAGACTCTT ATGAAATCCC ATTTATTGCG TTAAGGGAAG CGTTGATAAA TGCTGTTGTT CACAGAGATT ATTCAATTTT AGGATCAGAC ATTAAAGTTT CAATTTCTGA CAGCCTTTTA GAGATAACTT CTCCAGGTTC CCTTCCAAAT ACAATAAATA TTGATAACCT TGGAACAGGA TGTTCGGAAG TGAGAAATCC CATAATTGCA AGAATATTTA AAGAAACAAA ATTTATTGAG CAGTGGGGGT CAGGATTTAG AAAAATATTT AATGAATGTG AAAAATACGG GCTTAAAAAG CCGGAAATTA TTGAAACCTC ATTTTTAAAA GTTAGATTCT ATCGACCGCT TGTTGGTGAC CGGACGATAG TGGACGATAC TAAACTTGAC CGGACGATAG TGGACGATAC TAAACTTGAC CGGACGATAG TGGACGATAT GGATGAAAAT CATAAAAAAA TAATATTATA TATCTCCGAA AATGGTTCTG CTACATCAAC AGAAATAGAA AACTTAATCG ATTTAAAAAG AAGCAGAACT AGAGAAATTT TAAAAGAAAT GGTCGAAGAA AATATCCTCG AAATGAAAGG GAAAGCTCGA TCAACGAGAT ATACTTTAAA AAATAATTAA
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Protein sequence | MQILNDIEKG EGKTLEFKEQ MPQNNQIAKT AVAFSNTAGG KIIMGVKDGL NEIIGLDPDE IPKLRELIVN TIADSCEPQI SPEIFTQNID GKIILIIRIY PGSKKPYFLK KEGINNGTYL RIDNVNKKGD SNAVRRLMLE GENIAYDEDI NMEFKIEELD LNAILTQLEK LTGKKFTENV LENLKLIKSK NGKKYPTNAL IALLGLKNYK IRCARFKGND AVEFIDQKEI EGTIFEQIIM AEKFLKSHLN LSGKIEGLQR KDSYEIPFIA LREALINAVV HRDYSILGSD IKVSISDSLL EITSPGSLPN TINIDNLGTG CSEVRNPIIA RIFKETKFIE QWGSGFRKIF NECEKYGLKK PEIIETSFLK VRFYRPLVGD RTIVDDTKLD RTIVDDTKLD RTIVDDMDEN HKKIILYISE NGSATSTEIE NLIDLKRSRT REILKEMVEE NILEMKGKAR STRYTLKNN
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