Gene MmarC5_0563 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagMmarC5_0563 
Symbol 
ID4928490 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameMethanococcus maripaludis C5 
KingdomArchaea 
Replicon accessionNC_009135 
Strand+ 
Start bp518551 
End bp519147 
Gene Length597 bp 
Protein Length198 aa 
Translation table11 
GC content35% 
IMG OID640166067 
Producthypothetical protein 
Protein accessionYP_001097092 
Protein GI134045606 
COG category[S] Function unknown 
COG ID[COG1422] Predicted membrane protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones18 
Plasmid unclonability p-value0.173051 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGTTTGAAT CTATTTACTC CGTATTTTAC AATGCATTGG ATGCGATTTT TTTACCTATG 
GTACAAACGA TGCAACCTGC AATTTTTATA TTCGTAACCG CTTTTTTAGT ATCGTTTATT 
ATTAATTTAG CGACTAAAAT CCTGGTAAAT CAAGATAGGA TGGCTGAATT GAAAGATGAA 
CTTCAAGAAT TTCAGGTAAA AGCGAAAAAA GCATCAAAAG ATCCAGAATT AATGGCTGAA 
CTCCAAAAAG AACAGCAAAA AATGATGACC ATGCAAATGG AAATGATGAA AATGAGTTTC 
AAACCTATGA TTTACACGTG GGTTCCAATC ATCATCATAT TCGCTTACTT AAGACATGTA 
TATGACTTTG GCGGAATTTA CCACACAATG ATGCCAGCAT GGGATGGAGC AATAGTCCAA 
CTTCCAGTAA TCATTTCAAA AATAATATTT ATTGGAATCT GGCACTGGAT TGGTGGAATA 
TTCTACCACG GTGGCTTTGG TGTAGTTTCA AACACAACTC TCGGATGGCT TGGATGGTAC 
ATCTTGTGTT CAATGGGAAC ATCAATGGTA CTTAGAAAGT TAATGGGAAT AAAATAA
 
Protein sequence
MFESIYSVFY NALDAIFLPM VQTMQPAIFI FVTAFLVSFI INLATKILVN QDRMAELKDE 
LQEFQVKAKK ASKDPELMAE LQKEQQKMMT MQMEMMKMSF KPMIYTWVPI IIIFAYLRHV 
YDFGGIYHTM MPAWDGAIVQ LPVIISKIIF IGIWHWIGGI FYHGGFGVVS NTTLGWLGWY 
ILCSMGTSMV LRKLMGIK