| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0543 |
|---|
| Symbol | |
|---|
| ID | 4929170 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | + |
|---|
| Start bp | 498643 |
|---|
| End bp | 499224 |
|---|
| Gene Length | 582 bp |
|---|
| Protein Length | 193 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 36% |
|---|
| IMG OID | 640166047 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001097072 |
|---|
| Protein GI | 134045586 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG1432] Uncharacterized conserved protein |
|---|
| TIGRFAM ID | [TIGR00288] conserved hypothetical protein TIGR00288 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 32 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCTTTAC TTATTGATGG ACCAAACATG TTAAGAAAAG AATTCAATGT AGATCTTGAC
AAAGTAAGGG ATGCATTAGA GCAGTTTGGT GACATTGTTG TTGGTAGGGT TTATTTAAAC
CAGTATGCGT CAGATAAATT AATCGAAGCT ATTGCAAACC AAGGTTTTGA GCCAAGAATC
TCTGCTGGAG ATGTTGATGT TGAAATGGCA GTTGATGGAA CTGAACTGAT ATTTAATAAA
AATCTTGATA CTCTTGTTTA CATGACAAGA GACGCAGATT TTTTACCTGC AATCAGAAAA
GCCAAAGAAC GTGGAAAACA GATTATCGTT GTTGGGGCAG AACCTGGATT TAGTACTGCA
ATTCAAAACA TTGCTGACCA TGTAATTCGA GTAGAAGAAG ACTTCGAACT CGACAAAGAA
AAATTAGAGC AGAAAAAGCG AGAAAGAGAA CACAGTATTT CATCTTCAGA AAGTGCGTCC
GAAGAAAATA CCGAAGTTCA AAAAAATTCA GAGCCTAAAA AAAGTAGTAC TGATTCTTTC
AAAGATGGGA TAAGCAACAG TATTAACTGG CTCAAAAAAT AA
|
|---|
| Protein sequence | MALLIDGPNM LRKEFNVDLD KVRDALEQFG DIVVGRVYLN QYASDKLIEA IANQGFEPRI
SAGDVDVEMA VDGTELIFNK NLDTLVYMTR DADFLPAIRK AKERGKQIIV VGAEPGFSTA
IQNIADHVIR VEEDFELDKE KLEQKKRERE HSISSSESAS EENTEVQKNS EPKKSSTDSF
KDGISNSINW LKK
|
|---|
| |