| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | MmarC5_0166 |
|---|
| Symbol | rpl5p |
|---|
| ID | 4928309 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Methanococcus maripaludis C5 |
|---|
| Kingdom | Archaea |
|---|
| Replicon accession | NC_009135 |
|---|
| Strand | - |
|---|
| Start bp | 139595 |
|---|
| End bp | 140140 |
|---|
| Gene Length | 546 bp |
|---|
| Protein Length | 181 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 38% |
|---|
| IMG OID | 640165666 |
|---|
| Product | 50S ribosomal protein L5P |
|---|
| Protein accession | YP_001096698 |
|---|
| Protein GI | 134045212 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0094] Ribosomal protein L5 |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 9 |
|---|
| Plasmid unclonability p-value | 0.000530308 |
|---|
| Plasmid hitchhiking | Yes |
|---|
| Plasmid clonability | hitchhiker |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCATTCC AAGAAGTTTG GGAAAAAGAA CCTATGAAAA AACCAAGAAT CCAAAAAATC
ACTGTAAACT TCGGTGTAGG TGAAGCTGGA GATAGGTTAA CAATAGGTGC AAAAGTTATT
GAAGAACTCA CCGGCCAATC GCCAGTAAGG ACTTTAGCTA AACAGACAAA CCCTGCATAT
GGTATCAGAA AAAAGTTACC AATTGGATTA AAAGTAACAT TAAGAGGAAA AAACGCGGAA
GAATTCCTCA AAAATGCGTT CACTGCATTC AAAGCATGCG GTAAAGTACT CTACGCGTCA
TCATTTGACC AAGTTGGAAA CTTCTCATTT GGTGTTCCTG AACATATTGA CTTCCCAGGT
CAAAAATACG ACCCATCAGT TGGAATTTAT GGTATGGATG TCTGTGTAAC CTTCGATAAA
GCAGGATACA GAGTAAAATC CAGAAAATTA AAAAGAAGCC ACATTCCAAA GAAACACTTA
GTTACCAAAG ACGAAGCTAT CGAATACATC CAAACTAAAT TCGATACCGA AGTAGTTAGG
GAATAA
|
|---|
| Protein sequence | MSFQEVWEKE PMKKPRIQKI TVNFGVGEAG DRLTIGAKVI EELTGQSPVR TLAKQTNPAY
GIRKKLPIGL KVTLRGKNAE EFLKNAFTAF KACGKVLYAS SFDQVGNFSF GVPEHIDFPG
QKYDPSVGIY GMDVCVTFDK AGYRVKSRKL KRSHIPKKHL VTKDEAIEYI QTKFDTEVVR
E
|
|---|
| |