| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3861 |
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| Symbol | |
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| ID | 4923985 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4591588 |
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| End bp | 4592277 |
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| Gene Length | 690 bp |
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| Protein Length | 229 aa |
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| Translation table | 11 |
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| GC content | 50% |
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| IMG OID | 640165487 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095983 |
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| Protein GI | 127514786 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 13 |
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| Plasmid unclonability p-value | 0.248681 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 0 |
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| Fosmid unclonability p-value | 0.00000280431 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | unclonable |
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| |
Sequence |
| Gene sequence | ATGTCGTCTC ATCAGCCCGC ACCGCCTGCA AGACCCACAA ATAAAGTCTT CATCATAGGA
TTGCCGCGAA CCGGCACCAC AAGTGTCAGT GTGGCCCTGC TGGAGATGGG ACTCAGGGTG
GCGCACCAGG CCTTTACCAA ACAGGCCGTT ATTCTCGCCG ATGCCATTTC CGATGCGCCG
TGTTTTAGTG ATTATCGTCA GCTGCATAGC CTCTATCCGG ACGCTAAATT TATCTATCTG
GATAGGCCGT TAGATGCCTG GGTGCCTTCG ATGCAGATGC TGCTGAGCCG AATGTTGGTG
CATCTTGATA AAGAAAGAGG GCGTTTTCAC CCTCTGCTTA AGCGCAGTTT CGGCCATACC
TTTGGTATCT ATCGCGTGGC CGACCCCATG GATGCTGAGC ATCTGAAGAC TTGTTATCAA
GTGCATAAGC AGCAGGTGTT TGATTATTTT CATCAAGATC AGGGGCTCGC GCAGCAGTTC
TTGAGTTTAC AACTGGATGA TCCCCAGAGT TTGCCGCGCT TAGCCAATTT CATTGGGTTG
GATGCTCAAG TCGATAGTCC TCAACTTGCT TTTCCCCATC TCAATCGGGG GCGCAATGTC
GCCAGCTGGG ATGAATATAA GCATGAGCTA AAGATAAGCA GCAACCTGGC CGGGCCTGAA
AATCGCAAAT ATTTCAATTA TAAAATTTAG
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| Protein sequence | MSSHQPAPPA RPTNKVFIIG LPRTGTTSVS VALLEMGLRV AHQAFTKQAV ILADAISDAP
CFSDYRQLHS LYPDAKFIYL DRPLDAWVPS MQMLLSRMLV HLDKERGRFH PLLKRSFGHT
FGIYRVADPM DAEHLKTCYQ VHKQQVFDYF HQDQGLAQQF LSLQLDDPQS LPRLANFIGL
DAQVDSPQLA FPHLNRGRNV ASWDEYKHEL KISSNLAGPE NRKYFNYKI
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