| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3828 |
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| Symbol | |
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| ID | 4922833 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4559563 |
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| End bp | 4560390 |
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| Gene Length | 828 bp |
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| Protein Length | 275 aa |
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| Translation table | 11 |
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| GC content | 41% |
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| IMG OID | 640165457 |
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| Product | transposon Tn7 transposition protein TnsA |
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| Protein accession | YP_001095953 |
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| Protein GI | 127514756 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 3 |
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| Fosmid unclonability p-value | 0.00090554 |
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| Fosmid Hitchhiker | Yes |
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| Fosmid clonability | hitchhiker |
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Sequence |
| Gene sequence | ATGGCAAAAA GCAAATATGC ACCCTCTGAA GCCAAGTATA ATCGTTGGAT TAAAGAGGGC
CGAGGTCAAG GTGATGGAGC CAATTACCTG CCTTGGCTTA CCGTTAGAGA TGTGCCTTCT
GATGGCCGTT CTCATCGAGT CTTTGGCCAT AAATGTCAAC GTACTCATCA GTTACTTTCT
GATGTTGAGT TAGCTGTTTT CTTGTCTCTT GAGTGGAAGG CGGATGTTGT CGATATTCGG
GAGCAGTTTC CGCTTGAACG AGAGGATACA CTGATAATTG CCTCTGAAAA TGGTATTCGT
CATCCATCAG ATAGCGGCGT ACAGCTATAT ATGTCGTCAG ATTTTCTGGT TGATTCTCTT
GACCCTCAAT GTCCTAGATA TGTCATTCAA GCTAAGCGAT CGGAAGCTTT AAAAGATCCT
CGTATTTTCG AAAAGTTAGA AATTGAACGG CGATTCTGGA AAATGAAACA AATACCTTGG
TTTCTGGTGA CTGAGCATGA TGTTTCTCCG ACCCTTGTGC AGAATATTAG CTGGATCTAT
CCCTTAGAAA AGGATGACAT AGAAGATGAG TTTTTAGTTG ATAAAACAGC TTATTACAGT
GAAGTGTTTT ACCGTAATGA GAGGAAATTC GTAACCGATA TTTGTAAGGA TATTGACCGT
ACATATAACC TACCAGATGG TTCTTCTATC TATGAAATTA GGCAGTTACT CGCAAATCGT
TGCTTTTATT TTGATATGTC TCAGCCATTT CACCAACTCA TAGGTAAAGA TCTTGTGGCC
GAAAATATGG GGAACTTAAT CGGAGCTCGT CATGTTTCGA ATCAATGA
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| Protein sequence | MAKSKYAPSE AKYNRWIKEG RGQGDGANYL PWLTVRDVPS DGRSHRVFGH KCQRTHQLLS
DVELAVFLSL EWKADVVDIR EQFPLEREDT LIIASENGIR HPSDSGVQLY MSSDFLVDSL
DPQCPRYVIQ AKRSEALKDP RIFEKLEIER RFWKMKQIPW FLVTEHDVSP TLVQNISWIY
PLEKDDIEDE FLVDKTAYYS EVFYRNERKF VTDICKDIDR TYNLPDGSSI YEIRQLLANR
CFYFDMSQPF HQLIGKDLVA ENMGNLIGAR HVSNQ
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