Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3802 |
Symbol | |
ID | 4924156 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4525075 |
End bp | 4526259 |
Gene Length | 1185 bp |
Protein Length | 394 aa |
Translation table | 11 |
GC content | 58% |
IMG OID | 640165428 |
Product | hypothetical protein |
Protein accession | YP_001095927 |
Protein GI | 127514730 |
COG category | [R] General function prediction only |
COG ID | [COG2081] Predicted flavoproteins |
TIGRFAM ID | [TIGR00275] flavoprotein, HI0933 family |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAAACATC ATGACGTGAT CATTATCGGT GCGGGCGCGG CGGGCCTCAT GTGCGCGGCG ACGGCGGGCT ATCGCGGCCG AGACGTTCTG GTGTTAGATA ACGGCAAACA GGCGGGGCGC AAGATCTTAA TCAGTGGCGG TGGCCGCTGT AACTTCACCA ACCAGAAAGT GGAGCCGGCT AACTTTATCT GCGCCAACCC CCACTTTGTC AAGTCGGCCC TGGCACGATA CTCGTCTCAG GATTTTATCG AGCTGGTGGA GCGCCACGGC ATCGAGTATC ACCAGCGCGA TCATGGTCAG CTGTTCTGTA ACGACTCGGC CAAAGAGATA GTCAGCATGC TGCTGACCGA GTGCGAATGG GCGGGCGCTC AGGTGCAGCT CAGAACAGAT ATTCTTTCTA TCATCAAGCA GGATGACGGC CTTTTCAGGC TGGAGACCTG CAAGGGTGAA TACAGCTGTG AGTCGCTGGT GGTGGCAACC GGCGGGCTCT CCATGCCCAA GCTCGGGGCC TCGCCTTTCG GCTATCAGAT TGCCGAGCAG TTTGGTCTCA ATGTGTTGCC GACTCACGCC GGCCTGGTGC CCTTTACCTG GCACAGCGAG CAGAAGCAGA AATTTGAGCC GCTCTCTGGT ATTGCGGTGC CCAGTACCAT TACCGCCAAA GATGGTACCC AGTTTAGCGA GGCGCTGCTG TTTACCCACA GAGGCCTGTC GGGGCCGGCT ATTTTGCAGA TCTCCAATTA CTGGCAGCCG GGTGAGAGTA TTTCCATCAA CTTGCTGCCC CAGCTCGACG CCGCCCAGGC ATTGAGTGAG GCCCAGGAGC AGCATCCCAA GCAGAGCCTG CGCAATACCC TGTCGCAGTG GCTGCCGAAA CGTCTGGTCG AGGTGCTATT TGACGAGGCG CTGCTCAACA TGGCCCTTAA TCAGCTGGTG CATGCTCAGC GCGATCAGAT AGTAGACAAT CTCCACAACT GGCAGCTGCT GATGAATGGC ACCGAAGGCT ATCGTACTGC TGAGGTGACC TTAGGTGGCG TGGATACCAA CGAACTTTCT TCCAAGGATA TGCAGAGCAA GAAGGTGCCC GGACTCTATT TTGCCGGTGA GGTGATGGAT GTCAGCGGCT GGCTCGGCGG CTTCAACTTC CAGTGGGCCT GGGCATCGGG TGTCGCCGTC GGTCAGGCTG TGTAG
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Protein sequence | MKHHDVIIIG AGAAGLMCAA TAGYRGRDVL VLDNGKQAGR KILISGGGRC NFTNQKVEPA NFICANPHFV KSALARYSSQ DFIELVERHG IEYHQRDHGQ LFCNDSAKEI VSMLLTECEW AGAQVQLRTD ILSIIKQDDG LFRLETCKGE YSCESLVVAT GGLSMPKLGA SPFGYQIAEQ FGLNVLPTHA GLVPFTWHSE QKQKFEPLSG IAVPSTITAK DGTQFSEALL FTHRGLSGPA ILQISNYWQP GESISINLLP QLDAAQALSE AQEQHPKQSL RNTLSQWLPK RLVEVLFDEA LLNMALNQLV HAQRDQIVDN LHNWQLLMNG TEGYRTAEVT LGGVDTNELS SKDMQSKKVP GLYFAGEVMD VSGWLGGFNF QWAWASGVAV GQAV
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