| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3801 |
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| Symbol | |
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| ID | 4924155 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4522682 |
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| End bp | 4524925 |
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| Gene Length | 2244 bp |
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| Protein Length | 747 aa |
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| Translation table | 11 |
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| GC content | 43% |
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| IMG OID | 640165427 |
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| Product | peptidase S41 |
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| Protein accession | YP_001095926 |
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| Protein GI | 127514729 |
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| COG category | [M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0793] Periplasmic protease |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 5 |
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| Plasmid unclonability p-value | 0.0586877 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACAA GTATACGTAT CATGGTTTTG TTGCTTTCTT TGTTAGCGGC CTTCGGAGGT
GTGGCTAAGC CAAGTATTCC TGATCTAGAT TTCGAAACCT ACGATAAGTT TCCTGCTGAT
GGTTGGAGGG TATCTGGAGG GGAGGCCGGG TATAGCTTTT CGGTTGACGA TAAGGTTTTT
CAACGTGGGC AGCGATCAGT TTCGGTTGAG TTTAAAAGGG ATAAACCTAA CGCTGGCTCC
TTTGGTTATG GGTTGGCTCT CCAAGCAAAG GGGCAAAACA TTAAGCTGAG GGGGGCTGTG
AAAACTGAAG GTATTACTGA TGGATGGGCG GGGTTGATGC TTAACGTTCA CCCTAATCAA
GCCTTTAGTA ATATGCGAGA ACAGAAATTA TTCGGTGACA ATGATTGGAG GGATTTTGAG
ATTAGTTTGG ATGTTGATCT CAAAAATGCC TCAGCCATTA CAGTTGGTGG TGTGTTATCG
GGTAATGGGA AAGTTTGGTT CGATGATCTT CAGATATTGA TAGACGATAA GCCATTAACA
AGTTCTCAAC TACGTGAGAT TCCTCGTGCA TATAAGGATG ATGAATTTGA TGCTGGTTCT
AAGTTGGTTT TGTCGGGGTT GGATGAGGCA ACACTAGTAA ACTTAGACCT TTTAGGGAGG
GTGTGGGGGT TTCTGAAATA CCATCATCCC AATGTGGGAA GGGGAGATTA TAACTGGGAT
TATGAATTGT TTAGGTTTCT TCCCGATTAT CTTTCAGCTG TGGATGTTCA GGAGAGAGAC
AAGAGTCTGG TCGGTTGGAT CGATCGCTTA GGTAAGGTGA CTCCGTGTAT TGATTGTAAG
GTGACAAATC AGGAGTCTGT TCTGAAGCCA GATCATAGAT GGTTCTATGA ATTCGGTCTA
TCAAAAGAAC TAATCAAAAA ATTGAACTCG GTCTATGAGG ACCGGAGACA AGGCGCGAGC
TTTTATGTAA CCACAAACAG CAGGCGTAGG GTCATTTTTT CAAATGAAAA AGCTTATTTT
AATATGCCGT ATCCAGATGA TGGGTTTAGA TTATTAGCTT TATACCGATA CTGGAACATC
GTTCAATATT TCTTTCCGTA TAAGTATTTG ACTGATAAGG AGTGGAGTGG TGTTTTAGCT
GAATATCTTC CATTGTTTTT AGGGGCAAAA AATCGGTTAG ATTATGAAAA AGTGACGCTA
TCTTTAATCG CTGAGCTTAA GGATACGCAT GCAAATTTGT GGGCTGGTCG CGGTGAGGTT
GAGAAAATGC GCGGCGAATT TTACCCTCCA GTTTTCACAA GATTTGTTGA GGGTGAGCTT
GTTGTGGTGG ATTTTTATAC CGACAACGAG AGTAATATCA GCGATATGTC TCGCCTGGGC
GGCCTGTCCA TAGGCGATGT TATTACGGAG ATCGATGGTG TCGCCGTAGA AAAGTTGGTA
AAGGATAAGC TGCGTTATTA CCCGGCATCA AATGAGGCTT CAAGGCTCAG AGATATTGCT
CCTGATTTGT TGAGGTCGAA TAAGGCTGAA ATAGATATAA GCTTTAGGCG CGACAAGTTA
ATGGGTAATA CGTCGCTAAA ATTATTCAAA AAGGATGAGT TGGACTATTT CTATTTGTAC
CGCAAACCTA AGGGTGAAAA GAGCTATAAA AATATCGATG GGGATATTGG TTACGTTACT
TTGGCCACCA TTGAAAAAGA GGATGTGGAC TCTATAAAAA ATCAATTCAA GGATGCGGCA
GGCATCATAA TTGATATTCG AAATTATCCT AATACGCCAT CAATGTATAG TTTGGGGTCA
TTTTTCGTAG AAGATAAAAG CGCATTTGCG AAATTCACTT ATCCAAACAT AAATAACCCT
GGCGAGTTTG GCGTTGGTAA TGTAGCGGTT CTTAAACCAT CGGAAGTGAC TTTTAAAGGA
AAGCTAGTTG TCTTAGTGAA TGAAAATACG CAAAGCCAGG CTGAGTTTAC AGCGATGGCG
TTCAGGGCGG GTAGAGACAC TACGATAATA GGGAGTAAAA CGTCAGGCGC TGATGGCAAT
ATGGTTCGCT TGGATCTGCC GGGTGGACTG AGGACGGCAT TTTCCGGTCT TGGCGTTTAT
TACCCTGACG GTGGAGAAAC TCAAAGAGTG GGTATCATTC CCGATATAGA GGTGAGGCCA
ACTATTGTAG GGGTGAGAGA AGGTAGGGAT GAGTTAGTGG AGACGGCTAT TGAGGTTATT
AAAACTAGTT CGGTAGGACG TTAG
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| Protein sequence | MKTSIRIMVL LLSLLAAFGG VAKPSIPDLD FETYDKFPAD GWRVSGGEAG YSFSVDDKVF
QRGQRSVSVE FKRDKPNAGS FGYGLALQAK GQNIKLRGAV KTEGITDGWA GLMLNVHPNQ
AFSNMREQKL FGDNDWRDFE ISLDVDLKNA SAITVGGVLS GNGKVWFDDL QILIDDKPLT
SSQLREIPRA YKDDEFDAGS KLVLSGLDEA TLVNLDLLGR VWGFLKYHHP NVGRGDYNWD
YELFRFLPDY LSAVDVQERD KSLVGWIDRL GKVTPCIDCK VTNQESVLKP DHRWFYEFGL
SKELIKKLNS VYEDRRQGAS FYVTTNSRRR VIFSNEKAYF NMPYPDDGFR LLALYRYWNI
VQYFFPYKYL TDKEWSGVLA EYLPLFLGAK NRLDYEKVTL SLIAELKDTH ANLWAGRGEV
EKMRGEFYPP VFTRFVEGEL VVVDFYTDNE SNISDMSRLG GLSIGDVITE IDGVAVEKLV
KDKLRYYPAS NEASRLRDIA PDLLRSNKAE IDISFRRDKL MGNTSLKLFK KDELDYFYLY
RKPKGEKSYK NIDGDIGYVT LATIEKEDVD SIKNQFKDAA GIIIDIRNYP NTPSMYSLGS
FFVEDKSAFA KFTYPNINNP GEFGVGNVAV LKPSEVTFKG KLVVLVNENT QSQAEFTAMA
FRAGRDTTII GSKTSGADGN MVRLDLPGGL RTAFSGLGVY YPDGGETQRV GIIPDIEVRP
TIVGVREGRD ELVETAIEVI KTSSVGR
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