| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3798 |
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| Symbol | |
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| ID | 4924189 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4519559 |
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| End bp | 4520431 |
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| Gene Length | 873 bp |
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| Protein Length | 290 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 640165424 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_001095923 |
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| Protein GI | 127514726 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTAAATC TAGAACAACT CAACGCATTT ATTGCCGCCG TAGAGAAAGG ATCCTTTTCG
GCCGCCGCCC GACACATAGG CAAGAGCCAG AGCTCGGTCA GCATAGGGGT GAATAACCTC
GAGCTGGATC TTGGGGTCGA GCTGTTTGAC CGCAGCACCA AGTATCCTCA GCTCACCGAG
CAGGGGGAAC GACTCTATCA TCAGGCCAAG GCGCTTATGC GCCAGGCGAC TCGCATGGAG
AGTTATGCCA AGGGGGTGAT CGAGGCGGTC GAAGATCAGC TGGTTATCGG CGCCGACCCT
CTGGTGCCCA TGTCAGTGTT CGACTCGGCG CTGGAGAAGA TGGCGGAGAA GTTTCCCTTT
ACCCGGGTCA AATTGGTGAA GCTCACAGGC AACCACCTTA ATCGGGCGAT CGAAGCCGAT
GAAGTCGATG TCGGCTTTAA CATCATGTCC GAGGCGGTAC CTGAGAATCT GGATTTCATC
GGAATTGCAC GTATCGAGTG GGTGTGTATC TGTAGCCCAG ACTATAAGTT TGCGGATCTG
GAGGCGGTAG ACAGCGAGAT GTTGATCAAC GAGCGGCAGA TCGTCTGCTC CAGCATGTTG
CAAAACGAGT ATCTGGCCAA GCTTGGGCGC GTGTCTCAGG AAACCTGGGA GGCGTCAGAT
CTGGATGACA TGATACGTCT GGTGGAACAG GGCATCGGCT GGGGGATCAT CCCCTTGAGC
ATGTATGAAG AGAAGGCGGC CATAGGCACG CTCTCAACCT TTAAGCCTGT CATCGAGAAG
GAGACCGGCT TGATCACCGT GGATCTGCTG TGGAAGTCGA CCGCGCAGCT GGGCCCGGCG
AAGAGCTTTT TCATCGATCT GCTCAAGCGC TAA
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| Protein sequence | MLNLEQLNAF IAAVEKGSFS AAARHIGKSQ SSVSIGVNNL ELDLGVELFD RSTKYPQLTE
QGERLYHQAK ALMRQATRME SYAKGVIEAV EDQLVIGADP LVPMSVFDSA LEKMAEKFPF
TRVKLVKLTG NHLNRAIEAD EVDVGFNIMS EAVPENLDFI GIARIEWVCI CSPDYKFADL
EAVDSEMLIN ERQIVCSSML QNEYLAKLGR VSQETWEASD LDDMIRLVEQ GIGWGIIPLS
MYEEKAAIGT LSTFKPVIEK ETGLITVDLL WKSTAQLGPA KSFFIDLLKR
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