| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3744 |
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| Symbol | |
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| ID | 4920919 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4457740 |
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| End bp | 4460595 |
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| Gene Length | 2856 bp |
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| Protein Length | 951 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165370 |
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| Product | peptidase M6, immune inhibitor A |
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| Protein accession | YP_001095869 |
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| Protein GI | 127514672 |
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| COG category | [S] Function unknown |
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| COG ID | [COG4412] Uncharacterized protein conserved in bacteria |
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| TIGRFAM ID | [TIGR03296] M6 family metalloprotease domain
[TIGR03501] gammaproteobacterial enzyme C-terminal transmembrane domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 0 |
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| Plasmid unclonability p-value | 0.000497616 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | unclonable |
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Fosmid Coverage information |
| Num covering fosmid clones | 1 |
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| Fosmid unclonability p-value | 0.0000986058 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | decreased coverage |
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Sequence |
| Gene sequence | ATGAAGAGAC AGTATTATGC CGGTGCGGTG TCCGCATTGA GCCTCTCCCT CCTGCTGATT
GGCGCGTCGG CAAATGCCGC CCCGATCACC ATGAAGGAAG TGACTGGCGT GGCCGACGCC
GGGGTGATTA ACGAGCAGCA GATCCTTTAT TGGCTGGTGA AGCGTGGTGA GTTGGCCAGT
GATGCCAGCG AGGCGGAGAA GCGCGCCGCA ATTAAGGCCT ACACTCAGAG AGCCAAGGGC
TATCAGGAAA AAGGCGGTCA GGTTCAGGCC AAGCTGGAAT CTCAGCAGAG TATGCGTCAG
AAGGCCCAGC AGAAGGCGCG GGTGATGTCC TTCGTGACGC CCCAGGCCGA CGCCGATGTG
ACTAAGACGG TGAAGGTACT GGGTGTGCTG ATCGACTTTC CCGATCTACC CCACGACAAC
AACCGCCTGA CAGCCTCTGA TACACCCATG TATTACTCGA GCTACCCTGT CGCCCACTAT
CAGGATCTCA TGTTCTCGAC GACCGGCTTT GCCGGCCCTC AAGGGCAGAA CCTGTTGACC
GGGTATCAAT ACTATCAGGC GGAGTCCGGC GGAAGCTTCT ATTTCACCGG TAAAGTCTAT
GGCTGGTATA CCGCCAACCA AAATGCGGCC TATTACGGGC AGAATGACCC CAACAACGAC
GATGACGACA AGGCGGTCCC CGAGCTGGTG AAAGAGGCGG TGACCCAGGC GCTGGCTAGC
ATGACGCCCA GCGAAATAGC TTCGTTCGAC GTGGAAGACC CTTACGATCT CGACGGCGAC
GGCAACCTCA ATGAGGCCGA CGGCGATATA GACCACGTGA TGCTGTTTCA CTCCAGCATA
GGCGAAGAGG CCGGTGGTGG CGTCTTGGGT GACGATGCCA TCTGGTCGCA CCGCTACTTT
GTCTACGAAG GCAATTCGCC TGGCTATGAG ATCCCTGGCA CGGGCAAGAA GGTGTTTGGT
TACACGGTTC AGCCCATAGA TGCGGCCGCC GGTGTGGTCG CCCATGAATT TGGCCACGAT
CTAGGCCTGC CTGACGAGTA CGACACCAGC AACAGCGGCG ACGGCTCGCC CGTGGGCTCC
TGGTCTATCA TGTCTGGCGG TAGCTGGACC GGGGATATCC CTGGCAGCCA GCCAACAGGC
TTTAGCCCCT ATGCCCGCTC TTACCTGCAA AACAAGTATA AGGGCAAGTG GATCAACGAG
ACTCAGGTGG ATCTGGCCTC TATCCCGACG GGTGGTCAGG AGGTACAGCT GGCTGAGGCA
GTCAATGCCA ACCAGGTGAA CCAGATCTCT ATTCCTCTGC CTTCGGACAA TATTCCCTTC
AAGCAGCCCT ATGCCGGCAG CTATCAGTAC TATTCGGGCC AGGGTAACCT GCTAAGCACT
GCGGCCTCCT TTAGCCTGGA TTTCCCGGCG AGCAGTAGCC TGACCCTGAA GATGAAGGCG
CACTGGAACA TAGAGACAGA CTATGACTAT GTGCAGGTGA AGGTGGGCGA TGTGGCCTTA
GCCGGTAATC ACACCAAGGC CAGCAACATC ATCAATAACG CTAAGAACAT CATCACAGGT
AAGTCTTCTG ATGTGGCGGG TGCCGAAGGC GCCGATTCCT GGGTGGAGCT AAGTTTCGAC
CTCAGTGCCT ATGCGGGCAG CAGCGATCGT CAGATCAGCA TCGTCTACTT CACCGATGAG
GCGGTGGGCG ACTATGGTTT CGTGTTCGAT GAGCTTAAGG TGCTCGACGG TGAGTCGGTT
ATTTACAGCG ACGGCGCCGA GGAACCAAAT ACCATGGCGC TCAACGGTGG CTTTGCCAGA
ATCGATAACA CCCGTCCAGG CAAGCCGCGC CGCTACCTGG TGCAGCTGCG CAGCTACAAC
GGCGTCGATG CCGGATTGAA GAGTCATGCC TACGAGCCGG GTGTCTTGCT CTGGCTGGAG
AACTTCAACG AGTCTGACAA CAACTCCAGC AAGCATCCAG GCAGTGGCCT TATTGGTGTG
GTCGATGCCG ACCAGGACTT GATCGGCACC AATGGCACGG CGACCCAGAT CCGCGATGCC
ACCTTTAGCC TGTATAACCA ATCCACCTAT TTTGGTGATG ACCATCTGGC GGGCAACAGC
CTGTTTGATG ACAGCCAGGA CTATAGTGCG CCACTCAAGC CGCAGGCGGG CATCATACTG
CCTGAGCTGG GCCTGACTAT GGAGGTGGTT ACCCAGAGCA CGGATTCCAG CAGCGCCAAG
GTACGCTTCG AGTATTCGGG CACTGTGACG CCTCCGCCAG CGCCTGGGGC ATTGAGCGCC
TCTATCGCTA AGACACAAGA GGGCGCGAGC GTTAGCTTCA GCGCCAACGT GACTGGTGGT
GATGGCAACT ATCAGTATGC CTGGAACTTC GGTGTCAGCG GCGCTGCTAG CGCCCTGGCG
GCGCCAACCT ATGTGTATCA GGCATCGGGA AGCTATCAAG TCACCCTGAC GGTGACAGAT
GGCGCCGGTG AGTCGGTCAC GGCCAACACT CAGGTGACGG TCGTCATCCA GCCTGTGGCG
GATTTCAGTT ATAAGGCCAG CGATCTGACG GTGACCTTTA GCAACCTGTC CAATCAAGGG
GTTGGCTCGC TGAGCTATGG CTGGAACTTC GGCGATGGGC AGACGAGCAC GGCCGCCTCG
CCGACACACA CCTATGGTGC GGCGGGTAGC TATACAGTGA CTTTGACTGT GACCGATGAG
GCCAATAATC AGGCGAAAAA GAGCCTGACG CTGACGGTGA CCGCTCCCGT GGTGCAGCCG
CTGGTGGTCG AGACCAAGCA GGATTCGGGT GGTGGTAGTC TGGGTTGGAT CAGCCTGTCA
TTGCTGATGC TCCTGGGACT GCGCCGCAGA AGCTAA
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| Protein sequence | MKRQYYAGAV SALSLSLLLI GASANAAPIT MKEVTGVADA GVINEQQILY WLVKRGELAS
DASEAEKRAA IKAYTQRAKG YQEKGGQVQA KLESQQSMRQ KAQQKARVMS FVTPQADADV
TKTVKVLGVL IDFPDLPHDN NRLTASDTPM YYSSYPVAHY QDLMFSTTGF AGPQGQNLLT
GYQYYQAESG GSFYFTGKVY GWYTANQNAA YYGQNDPNND DDDKAVPELV KEAVTQALAS
MTPSEIASFD VEDPYDLDGD GNLNEADGDI DHVMLFHSSI GEEAGGGVLG DDAIWSHRYF
VYEGNSPGYE IPGTGKKVFG YTVQPIDAAA GVVAHEFGHD LGLPDEYDTS NSGDGSPVGS
WSIMSGGSWT GDIPGSQPTG FSPYARSYLQ NKYKGKWINE TQVDLASIPT GGQEVQLAEA
VNANQVNQIS IPLPSDNIPF KQPYAGSYQY YSGQGNLLST AASFSLDFPA SSSLTLKMKA
HWNIETDYDY VQVKVGDVAL AGNHTKASNI INNAKNIITG KSSDVAGAEG ADSWVELSFD
LSAYAGSSDR QISIVYFTDE AVGDYGFVFD ELKVLDGESV IYSDGAEEPN TMALNGGFAR
IDNTRPGKPR RYLVQLRSYN GVDAGLKSHA YEPGVLLWLE NFNESDNNSS KHPGSGLIGV
VDADQDLIGT NGTATQIRDA TFSLYNQSTY FGDDHLAGNS LFDDSQDYSA PLKPQAGIIL
PELGLTMEVV TQSTDSSSAK VRFEYSGTVT PPPAPGALSA SIAKTQEGAS VSFSANVTGG
DGNYQYAWNF GVSGAASALA APTYVYQASG SYQVTLTVTD GAGESVTANT QVTVVIQPVA
DFSYKASDLT VTFSNLSNQG VGSLSYGWNF GDGQTSTAAS PTHTYGAAGS YTVTLTVTDE
ANNQAKKSLT LTVTAPVVQP LVVETKQDSG GGSLGWISLS LLMLLGLRRR S
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