| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3665 |
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| Symbol | |
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| ID | 4921887 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4367392 |
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| End bp | 4368414 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165287 |
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| Product | succinylglutamate desuccinylase/aspartoacylase |
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| Protein accession | YP_001095790 |
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| Protein GI | 127514593 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG3608] Predicted deacylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAAG CACTTACCAT AGCGGGTGTC GATATCCAGC CCGGCACCCA GCACCAGCTT
GAACTACCGG TAGCCAGCCT GTACACGGAC ACTCAGGTGT CGATACCTGT GCATGTGATC
CGCGCTAAGA AAGATGGCCC CAAGGTGTTT GTCAGCGCCG CGGTGCATGG CGATGAGCTC
AATGGTATCG AGATCATCCG CCGGTTGATC CAGAGTAAGC TCAAGCTGCT CAAGGGTACC
TTGATCTTGG TGCCCATGGT CAATGTCTAT GGAGTGCTGA ATCAGAGCCG TTACATGCCC
GACAGGCGTG ACCTTAACCG CTGTTTTCCC GGTTCGCCCA AGGGGTCGCT GGCCGGACGG
GTGGCATACA CCTTCTTAAA CAGCATAGTG CAGCACTGCG ACTATGGTAT CGACCTGCAT
ACCGGGGCTA TCCACAGATC TAACCTGCCA CAGATACGTG CCAACCTGGA TGACGAGCAG
ACCCTGGCCC TGGCTCAGGC CTTCGGCGTG CCTGTGCTGC TCAACGCCAA CGTGCGCGAC
GGCTCGCTGC GGGAAGCCGC GGTGAACAAG GGCACCCGGG TGCTGCTGTA TGAGGCAGGC
CAGGCGCTAA GGTTTGACGA GCTGTCGATA CAGACAGGCG AGCGGGGGAT CCTCAATGTG
CTGTCGTCAC TTGGGCTGAT CCGTAAACGC CGCCTGCGCA AGAAGATAGA ACCCTTCATC
GCCAACCGCA GCGACTGGAC CCGCGCCTCG GCCAGCGGCT TCGTGTGCGA GTTTGCCAAG
CTGGGCGCCT ATGTGGAGAA GGGCCAGGTG CTGGCGGAGA TCAACAGCCC ACTGGGCGAG
CTGATCCAGA GCGTGGTATC GAACCGCACG GGTATCGTCA TAGGCAAGCA GAATATCCCC
CTGGTGCTGG AGGGAGACGC CATGTTCCAT GTGGCCTACT TTGGTAGCGC CGCCGACGAG
GTGGCGGAAC ATATTGAGAT AATGAACGAT CAGATAATGC CGCTGACCAC CCAGACCATC
TAG
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| Protein sequence | MSEALTIAGV DIQPGTQHQL ELPVASLYTD TQVSIPVHVI RAKKDGPKVF VSAAVHGDEL
NGIEIIRRLI QSKLKLLKGT LILVPMVNVY GVLNQSRYMP DRRDLNRCFP GSPKGSLAGR
VAYTFLNSIV QHCDYGIDLH TGAIHRSNLP QIRANLDDEQ TLALAQAFGV PVLLNANVRD
GSLREAAVNK GTRVLLYEAG QALRFDELSI QTGERGILNV LSSLGLIRKR RLRKKIEPFI
ANRSDWTRAS ASGFVCEFAK LGAYVEKGQV LAEINSPLGE LIQSVVSNRT GIVIGKQNIP
LVLEGDAMFH VAYFGSAADE VAEHIEIMND QIMPLTTQTI
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