Gene Shew_3649 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3649 
Symbol 
ID4922183 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4350684 
End bp4351046 
Gene Length363 bp 
Protein Length120 aa 
Translation table11 
GC content57% 
IMG OID640165271 
Producthypothetical protein 
Protein accessionYP_001095774 
Protein GI127514577 
COG category[S] Function unknown 
COG ID[COG4994] Uncharacterized protein conserved in bacteria 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones33 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones16 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGCCAGA CCATTATCGA ACTGGAACTC GCGCTGCTTA GCCCAGAGGT GCGCTGCGAT 
GCCAATGTGC TCGACGAGCT GATCCATGCC GATTTCTTGG AGGTGGGCGC TACCGGGATG
AGTTTTGGCA AGCCCGAGGT GCTGGCGCGT CTGCCCAAGG AGAAGCCGCC GGCGTTTAAG
ATAAGTGATA TGCAGTATCG CTTGTTGAGT GAGAACCTGG CTCAGCTCAA CTATCGCGCC
TGTTTTAAGC CGGTGAACGA GGTGGATAAG CGCTATTCGC TGCGCACCTC GCTGTGGAAA
TGCGATGGGG GGCGTTGGCA GATGATCTAT CATCAGGGCA CGCCCTGCGC GCCCTTCTTC
TAA
 
Protein sequence
MRQTIIELEL ALLSPEVRCD ANVLDELIHA DFLEVGATGM SFGKPEVLAR LPKEKPPAFK 
ISDMQYRLLS ENLAQLNYRA CFKPVNEVDK RYSLRTSLWK CDGGRWQMIY HQGTPCAPFF