| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3638 |
|---|
| Symbol | envZ |
|---|
| ID | 4922391 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4338364 |
|---|
| End bp | 4339674 |
|---|
| Gene Length | 1311 bp |
|---|
| Protein Length | 436 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 60% |
|---|
| IMG OID | 640165260 |
|---|
| Product | osmolarity sensor protein |
|---|
| Protein accession | YP_001095763 |
|---|
| Protein GI | 127514566 |
|---|
| COG category | [T] Signal transduction mechanisms |
|---|
| COG ID | [COG0642] Signal transduction histidine kinase |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 15 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAGCTGGT TTAAACGCTT TCTTCCCCGC AGCGCCTTCA GTCAGACAGT ACTGCTGATA
GGCTCGCTGC TGCTGGTCAA TCAGCTGGTC TCCTATCTCT CGGTGGCTGT GTACTTTATT
CAGCCCACCT ACCAGCAGAT CAACCAGCTG ATCGCCCGCC AGGTAAACCT GCTGTTCGTC
GACGGCGTAG ATGTCGGCCG CGAACACCTC TCCATGGTCG ATGCCCTCAA CGCCAAGGTG
CGCGACGACA GCATGGAGAT CTACAACCTT AAGGATGCCC GCGAGGCTGG GGTCGATCGC
GCCGCCTACT ACAGCCTGCT ATCGGCGCAG ATGTCGGAGC ATCTGGGCGG CAAGGCCGAG
GTGCGCATCG CCCAGGGCAA AGAGTTCGAG ATCTGGATCC GCCCGCCACA GGCGCCATCG
GTATGGATTA AGGTACCTCT GACCGGCTTC AACGAATTTG GGCTCTCGCC CCTGACTCTC
TATCTCATGG TGATCGGTGC CCTGAGTGTC GCCGGTGGTT GGTGGTTTGC CCGCAAGCAG
AACAAACCGC TCAAGCGCCT GCAGAAGGCG GCGATCTCCG TCTCCCGGGG CGATTATCCC
GCGCCCCTGC CCCCCAGTGG CTCCACAGAG ATCATCGAGG TGACCAACGC CTTTAACCAG
ATGTCCCGCA GCATGCAGCA GCTGGAGCAG GACAGGGCCC TGTTGATGGC GGGGATCTCC
CACGATCTGC GCACGCCGCT GACCCGCATC CGTCTCGCCT CCGAGATGAT GGTGGAAGAA
GATGAGTACC TCAAAGAGGG CATAGTGCAT GACATCGAGG ATATGGACGC CATCATCAAC
CAGTTTATCG CCTACATACG TCAGGATCAG GAGGCCAACC GCGAACTGGT GCAGATAAAC
GATCTGCTGC AGGATATCGC CCAGGCCGAA ACCAACCGCG ACGGCGAGAT AGTGCTAGCG
CTAAACGAGT GCCCCGAGAT CCCCATGCAG GCGGTGGCGG TCAAACGCAT CATCAGCAAC
CTGGTAGAGA ATGCCTTCCG CTACGGCAAC GGCTGGGTGC AACTGAGTTC CAGTTTCGAC
GGTCGCCGGG TTGGCTTCGG CGTGGAAGAC AACGGTCCAG GCATCCCAAG CGATCAGATC
CCCAAGCTGT TCCAGCCCTT TACCCAAGGT GATAGCGCCC GCGGCAGCGT CGGCTCAGGC
CTGGGCCTGG CGATCATCAA GCGAATCGTC GACCGTCATC AGGGCCAGGT AGTACTCACC
AACCGCCCCG AAGGCGGCCT GCATGCCCAG GTATGGCTGC CGCTGGAATA G
|
|---|
| Protein sequence | MSWFKRFLPR SAFSQTVLLI GSLLLVNQLV SYLSVAVYFI QPTYQQINQL IARQVNLLFV
DGVDVGREHL SMVDALNAKV RDDSMEIYNL KDAREAGVDR AAYYSLLSAQ MSEHLGGKAE
VRIAQGKEFE IWIRPPQAPS VWIKVPLTGF NEFGLSPLTL YLMVIGALSV AGGWWFARKQ
NKPLKRLQKA AISVSRGDYP APLPPSGSTE IIEVTNAFNQ MSRSMQQLEQ DRALLMAGIS
HDLRTPLTRI RLASEMMVEE DEYLKEGIVH DIEDMDAIIN QFIAYIRQDQ EANRELVQIN
DLLQDIAQAE TNRDGEIVLA LNECPEIPMQ AVAVKRIISN LVENAFRYGN GWVQLSSSFD
GRRVGFGVED NGPGIPSDQI PKLFQPFTQG DSARGSVGSG LGLAIIKRIV DRHQGQVVLT
NRPEGGLHAQ VWLPLE
|
|---|
| |