| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3608 |
|---|
| Symbol | |
|---|
| ID | 4922513 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Shewanella loihica PV-4 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009092 |
|---|
| Strand | + |
|---|
| Start bp | 4306884 |
|---|
| End bp | 4307174 |
|---|
| Gene Length | 291 bp |
|---|
| Protein Length | 96 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 640165230 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001095733 |
|---|
| Protein GI | 127514536 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3776] Predicted membrane protein |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGAAAATGG TCATTCTCAT CGGCAAGGGG ATCACCCTGT TTGCCTGGGC CGTGATGCTC
TACAACCTGT TTGTCCCGGC AGAAGGCAAC ATAGGCATGC TGCTGACGCT ACTGCTGGGG
ATCACCCTGG TGATGCATAG CCTGCAGACG CTGATCTTCC GCACCCTGTT TAAGCCGCTG
ATGACCATAG GTTACGGCGA TTACCTGAGT GTCATGCTCT TTGGCGTCTT CAGCCTGCTG
GAATATCGCC AGCGCGTGAT GCAGCAAGGC GTCACCGACA ATCAGGCCTA A
|
|---|
| Protein sequence | MKMVILIGKG ITLFAWAVML YNLFVPAEGN IGMLLTLLLG ITLVMHSLQT LIFRTLFKPL
MTIGYGDYLS VMLFGVFSLL EYRQRVMQQG VTDNQA
|
|---|
| |