| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3568 |
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| Symbol | |
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| ID | 4922641 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4262463 |
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| End bp | 4263332 |
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| Gene Length | 870 bp |
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| Protein Length | 289 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165190 |
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| Product | cation diffusion facilitator family transporter |
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| Protein accession | YP_001095693 |
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| Protein GI | 127514496 |
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| COG category | [P] Inorganic ion transport and metabolism |
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| COG ID | [COG0053] Predicted Co/Zn/Cd cation transporters |
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| TIGRFAM ID | [TIGR01297] cation diffusion facilitator family transporter |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.0000153022 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGACCGACA CTTCCCAATA CGATTTTTGG GTGAAACTGG CTAGCCGCGC CGCCGTGGCG
ACCGCGCTCA CCCTGATAGT CATCAAGCTG GCGGCCTGGC TCTATTCAGG TTCCGCCAGC
ATGCTGGCTT CGCTCACCGA CTCCTTCGCC GATGCCCTGG CTTCCATTGT CAACTTCATC
GCCATTCGTT ACGCCATAGT GCCCGCAGAC CAAGACCATA GGTATGGTCA CGGTAAGGCA
GAGCCCCTGG CTGCCCTGGC CCAGTCGGCC TTTATCCTGG GCTCGGCGCT GCTGCTCTTA
CTACATGGCA GCGACAGGCT GATTAATCCA ACCCCCATCA ACCATGCCAT GGTGGGCGTG
GTGGTGTCGG TGATCGCCAT AGTGCTGACT CTGGCCTTGG TGCTGCTGCA ACGCCGCGCC
TTGGCTAAGA CCTCCAGCAC CATAGTGGAG GCCGACGCCC TGCACTATAA GTCGGATCTG
TTTCTCAACA GCGCCGTGCT GATGGCCCTG GTCTTGTCGC AGTTTGGCTG GTGGTGGGCC
GATGGCCTGT TCGCCATACT GATCGCCCTG TTTATCGGTC AGCAGGCGGT CGATCTGGGT
TACCGCTCGG CGCAGTCGCT GCTGGACCGG GAGCTGGATG CCGATACCAA GCTCAAAATC
GTCCAGGCGA TAGAGAAAGA CCCGCGCATA AATGGTTTTC ATGATCTGCG TACCCGCACT
TCGGGCAAGA CCACCTTCGT GCAGTGCCAC CTGGAGCTCG ACGGCAGACT GCCACTGGTG
GAGGCCCATG CCATCGCCGA TGCCGCCGAG GCAAGGGTGA GAAGTCTGTT CGAGCACGTG
GAAGTGCTGA TCCACCAAGA CCCCGTCTAA
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| Protein sequence | MTDTSQYDFW VKLASRAAVA TALTLIVIKL AAWLYSGSAS MLASLTDSFA DALASIVNFI
AIRYAIVPAD QDHRYGHGKA EPLAALAQSA FILGSALLLL LHGSDRLINP TPINHAMVGV
VVSVIAIVLT LALVLLQRRA LAKTSSTIVE ADALHYKSDL FLNSAVLMAL VLSQFGWWWA
DGLFAILIAL FIGQQAVDLG YRSAQSLLDR ELDADTKLKI VQAIEKDPRI NGFHDLRTRT
SGKTTFVQCH LELDGRLPLV EAHAIADAAE ARVRSLFEHV EVLIHQDPV
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