| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3567 |
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| Symbol | |
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| ID | 4922640 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4261676 |
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| End bp | 4262329 |
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| Gene Length | 654 bp |
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| Protein Length | 217 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 640165189 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_001095692 |
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| Protein GI | 127514495 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.0246266 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCAGAAG CTAAAAGTCG TGTCGGCCGT CCCAGTGGCG ACACTCAAAA TCGCGATAAG
CTGATCCTGG CGGCAAGAAA TCTGTTTATC GAACGTCCCT ATGCTCAGGT GTCGATCCGC
GAGATCGCCA GCCTGGCGGG CACAGACCCC GGCCTGATCC GTTACTACTT CGGCTCCAAG
GAGAAGTTGT TCTCCACCAT GATCCATGAG ACGGCGATGC CCGTGCTGGC CCAGCTGCAT
AAGGCGAGAA GAGAGACGCG CCAGGAGAGC CCGGCGGCCT TGCTACAGAC CTACTACAGC
GTCATGAGCA AGCATCCGCA CTTTCCCAGA CTCATGCTGC GCATCGCCGG ACTGGATCAG
AGCCTGCCGG AAAATGCCGA GGTGACCAAG GCCTTCTATG AGGTGGTTAA CTTCGAGAAT
ATCGCCATAT TTCAACGATT AAAGGATAAG AATCTGCTGA AGGACGATGT GGACGCCCAC
TGCGCTCAGC TGAGCTTCTT CGCCATGATG GTGTTTCCCT TTATCGTGCC GGAAAACTTA
CTCGAAAGGG TCGGCATAGA ACTTACGCCG GACTTTCTAC AACTACTTGC CGAGCAAAAT
ACCCGTCTAC TGCAGCGTGG TCTGATGGAC GTGAAGGATG AGAGAGATGA ATAA
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| Protein sequence | MAEAKSRVGR PSGDTQNRDK LILAARNLFI ERPYAQVSIR EIASLAGTDP GLIRYYFGSK
EKLFSTMIHE TAMPVLAQLH KARRETRQES PAALLQTYYS VMSKHPHFPR LMLRIAGLDQ
SLPENAEVTK AFYEVVNFEN IAIFQRLKDK NLLKDDVDAH CAQLSFFAMM VFPFIVPENL
LERVGIELTP DFLQLLAEQN TRLLQRGLMD VKDERDE
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