| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3556 |
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| Symbol | |
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| ID | 4922691 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | - |
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| Start bp | 4247251 |
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| End bp | 4248363 |
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| Gene Length | 1113 bp |
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| Protein Length | 370 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 640165178 |
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| Product | aminotransferase, class V |
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| Protein accession | YP_001095681 |
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| Protein GI | 127514484 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0520] Selenocysteine lyase |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTACCAGA ATGATTTTGT GATGCCAAAG TCGGTCTACC TGCTCAACCA CTCGGTGGGC
AGGCCGCTGC AGAGTCTGCG CCAGGCGTTC GACGAGCGTT TCTTCCTGCC CTGGCAGGGC
TCGGGGCGAG AGCCCTGGGG CGACTGGCTC TCTGTGGTGG AGGATTTTCG CGTCCAGCTC
GCTAGGCTGT TCAACAGCGA GACCCGGCTG TTTTGCCCTC AGGTTAACCT TTCCAGCGGT
CTCACTAAAT TGGTGCAGTC CCATTCAAGG CTGCGCCGCC CCGGCGCCGT GATCCTGATG
AGCGAGAATG ATTTCCCCAG CATGGGCTTT GCCTTACGTC AGGCGCTGCC TGAGGCTGAG
ATACGTTTCA TCCCGGCTAA TCTGGATGTG AGTCTGGCCG AGGTGTGGCA GGCACATCTG
ACCGACGATA TCGATCTGGT GTTTATCAGC CACGCCTATT CCAATACGGG TCAGCAGGCG
CCGTTGGATT ATCTAATACC TAAGGTGCGC GAGCTGGGGG CGCTCTCTCT GGTGGATGTG
GCCCAGGCCG CCGGGGTATT GCCCCTAGAT CTTAATGCCC TCAAGCCAGA TTTCATGTTG
GGCTCCAGCG TCAAGTGGCT CTGCGGCGGG CCGGGGGCGG CCTACCTCTG GGTGAGCGCC
GCTCAGCTGG TGCATTGCTC ACCCCAGGAT GTGGGTTGGT TCAGCCATGA GAACCCCTTC
GAGTTCGACA TTCACGATTT TCGCTACCAT GACTCGGCGC TCAAGTTCTG GGGCGGCACG
CCGTCTGTGG CGCCTTTCGC CCTTGCGGCC CACAGCATAG GGTATTTTGC CGAGCTGGGT
AGCGACAAGG TGCGTCAGCA CAACCTGATG CAGCTGCAGC GTATCTGGCG TCAGGCGGGT
GATGCTCTGG TCTCACCCTC GGATGCGGCC CGCTGTAGCG GCACTGCCAT CTTAGACTTT
GGCGAAGACC AGCAAGCTGT GGTCGAAGCG TTGACCCAGG CCGATATCAG CCTGGATGTG
CGCAAGCAGG GGATGCGGAT CTCGCCTCAC ATCTACAACG GCGAGCAGGA TTTGCAGCGG
CTGCTTGAGG CCCTGGCGCC TTTCTGTCGT TAG
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| Protein sequence | MYQNDFVMPK SVYLLNHSVG RPLQSLRQAF DERFFLPWQG SGREPWGDWL SVVEDFRVQL
ARLFNSETRL FCPQVNLSSG LTKLVQSHSR LRRPGAVILM SENDFPSMGF ALRQALPEAE
IRFIPANLDV SLAEVWQAHL TDDIDLVFIS HAYSNTGQQA PLDYLIPKVR ELGALSLVDV
AQAAGVLPLD LNALKPDFML GSSVKWLCGG PGAAYLWVSA AQLVHCSPQD VGWFSHENPF
EFDIHDFRYH DSALKFWGGT PSVAPFALAA HSIGYFAELG SDKVRQHNLM QLQRIWRQAG
DALVSPSDAA RCSGTAILDF GEDQQAVVEA LTQADISLDV RKQGMRISPH IYNGEQDLQR
LLEALAPFCR
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