Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Shew_3538 |
Symbol | |
ID | 4922841 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella loihica PV-4 |
Kingdom | Bacteria |
Replicon accession | NC_009092 |
Strand | - |
Start bp | 4227898 |
End bp | 4228335 |
Gene Length | 438 bp |
Protein Length | 145 aa |
Translation table | 11 |
GC content | 53% |
IMG OID | 640165160 |
Product | hypothetical protein |
Protein accession | YP_001095663 |
Protein GI | 127514466 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 17 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAACAC GTCATTTCTT TAGCAGCCTA TTTGCCGCCT TTGCTGCACT GACTTTAGTT AACATCGCCA GCGCCGCCAG CCTCACCCTA CCCGATGAAC TTCAGGTACA AGGCAGCGAA GTGCAAGTGG GTCATGAGCA GATCGTGCTC AGCCTGGATG CGGGTAAACA ACTGGTCGAG CTGGTATATC GCGATATCTT TGCCGATAAC GCCGATGATT CAGGCGCCTG GGTGACCTCA GAGCCCCTCT ATCTTGCCTT AGATGTCAAA GGCGACGATG CCTACCGTCT GGTGCTTCCC GAGATAGTGA CTCAGCAGGA CGCCCGGGCC TTTATCAGTG CGCCTAAGGC TCGCCTGGTG TCACAAACTG GCCAGCAGCA GGAATTAACC CTGATGAATC ATCAACAACT GATGGAAAAG ATCTGGTTAG CACAATAA
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Protein sequence | MKTRHFFSSL FAAFAALTLV NIASAASLTL PDELQVQGSE VQVGHEQIVL SLDAGKQLVE LVYRDIFADN ADDSGAWVTS EPLYLALDVK GDDAYRLVLP EIVTQQDARA FISAPKARLV SQTGQQQELT LMNHQQLMEK IWLAQ
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