Gene Shew_3538 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3538 
Symbol 
ID4922841 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4227898 
End bp4228335 
Gene Length438 bp 
Protein Length145 aa 
Translation table11 
GC content53% 
IMG OID640165160 
Producthypothetical protein 
Protein accessionYP_001095663 
Protein GI127514466 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones24 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones17 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAACAC GTCATTTCTT TAGCAGCCTA TTTGCCGCCT TTGCTGCACT GACTTTAGTT 
AACATCGCCA GCGCCGCCAG CCTCACCCTA CCCGATGAAC TTCAGGTACA AGGCAGCGAA
GTGCAAGTGG GTCATGAGCA GATCGTGCTC AGCCTGGATG CGGGTAAACA ACTGGTCGAG
CTGGTATATC GCGATATCTT TGCCGATAAC GCCGATGATT CAGGCGCCTG GGTGACCTCA
GAGCCCCTCT ATCTTGCCTT AGATGTCAAA GGCGACGATG CCTACCGTCT GGTGCTTCCC
GAGATAGTGA CTCAGCAGGA CGCCCGGGCC TTTATCAGTG CGCCTAAGGC TCGCCTGGTG
TCACAAACTG GCCAGCAGCA GGAATTAACC CTGATGAATC ATCAACAACT GATGGAAAAG
ATCTGGTTAG CACAATAA
 
Protein sequence
MKTRHFFSSL FAAFAALTLV NIASAASLTL PDELQVQGSE VQVGHEQIVL SLDAGKQLVE 
LVYRDIFADN ADDSGAWVTS EPLYLALDVK GDDAYRLVLP EIVTQQDARA FISAPKARLV
SQTGQQQELT LMNHQQLMEK IWLAQ