Gene Shew_3532 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagShew_3532 
Symbol 
ID4922865 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella loihica PV-4 
KingdomBacteria 
Replicon accessionNC_009092 
Strand
Start bp4220079 
End bp4220492 
Gene Length414 bp 
Protein Length137 aa 
Translation table11 
GC content57% 
IMG OID640165154 
Productglobin 
Protein accessionYP_001095657 
Protein GI127514460 
COG category[C] Energy production and conversion 
COG ID[COG1017] Hemoglobin-like flavoprotein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones31 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones15 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAGCCTGA CGTCCACCCA GATAGATCTT GTACAAACCT CATTTAAACA GGTCGAGCCG 
ATCAGCGAGC AGGCGGCGGC AGTTTTTTAC GATGCCCTGT TTCAGATAGA CCCCAATCTG
CGGCCACTGT TCAAGCAGGA TATTCGGTCT CAGGGACGTA AGTTGATGGC CATGTTGAAG
GCGGCGGTAG AGGGACTGAC AGATCTCGAC GCCTTGGTGC CTCAGCTGCA TGAGCTGGCG
CGAAGGCACC AAGCCTATGG CGTCAGGCAA TCCCACTTTA CCCCTGTGGG TAACGCCCTG
CTTTATACCC TGAAGACAGG CCTGGGAGAG GCTTACACCC GCGAGGTGCG CGAGGCCTGG
GTGGCGGTGA TCCATCTGGT GGCCGATACC ATGAAGCCGC TGCTGGACAG GTAA
 
Protein sequence
MSLTSTQIDL VQTSFKQVEP ISEQAAAVFY DALFQIDPNL RPLFKQDIRS QGRKLMAMLK 
AAVEGLTDLD ALVPQLHELA RRHQAYGVRQ SHFTPVGNAL LYTLKTGLGE AYTREVREAW
VAVIHLVADT MKPLLDR