| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3520 |
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| Symbol | |
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| ID | 4922972 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4205923 |
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| End bp | 4208448 |
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| Gene Length | 2526 bp |
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| Protein Length | 841 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 640165142 |
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| Product | hypothetical protein |
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| Protein accession | YP_001095645 |
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| Protein GI | 127514448 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG4258] Predicted exporter |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCCTCA GACTCAGCGA CCGCCTGAGT CGCCTCTCTG CCAATACCCG CCTGGTTATC
TGGCTGGTGC TGCTGGCCGC CATGGCGCTG CTTGCCGCCC AGGCGCTGAG CCGAGGCGCC
GGGGTGCAGA GTGACATCTT GGCCATGCTC CCCAAGATCC AGGAAGATCC CCTCACCCAG
AGGGCGATAG ACAGGGTCGA GCAGCAGCTG GCTAATCGCA TCTACCTAGG GGTCGTCAGC
CCGGACCAGG CCACCGCCAT CAAAGGCGCC AAGCAACTGC TCAGTGCACT TCAGGGGGCG
CCTGAGGCTT TTACCCAGGT GCAGAGCGCC GATATGCAGG GCGCCCAGGC ACTCAATCGC
TTCTATTTTC CCTATCGCTT TCACCTGCTC ACTACGCAGC AGAAAGCTCT GCTCGCAACT
GGACAATTAG CCAAGTTAGA GGCTAATACG CTCGCTCAGC TCTACAATGC CTTCGGCTAC
GCCAATAGCC AACTATTGAG CCAAGACCCG CTTCTGCTCT ACCCCGAGCT ACTGAAACAA
CTCTCGCCCC AACGCCGACT CAAGGTGGTC GACGGCATTC TGGTAGGCCA GGAATTAGCC
CAGGAAGCCA GATCAAACAA AGACACGCAA GGAAACAGCG TCGCTATCGT CATGGCCCAG
GGAGTCGGCA GCGCCTTCAA CCCTAAGGCG CAGGAGCTGC AGTTAGCCAG GCTCGAAGAG
GCTATAAGCC AGATGCAGCA GAGCCTTGAG CCTAAGCAAG AAGTGACAGT AATAAAAGGT
GGCGCCTTGT TTCATGCCGC GGCGGCAACA ACACAGGCGA AGAGAGAGGT CTCCAGCCTG
GGACTTGCCT CGCTGATCGG CGTGATCCTG CTGGTATGGC TGGCGTTTCG CTCCATGATG
CCGCTCACCA TAGCCGCCCT AACCATAGCC ACCAGCCTAC TGTTCGCCCT GAGTGCGACC
CTGTGGATCT TCACCCAGGT TCACCTGCTC ACCCTGGTAT TCGGTACCAG CCTGATCGGG
ATCGCCATCG ACTACAGCTT CCACTTCTAC TGCGAACGCT TGCAAAGCCA GAAAGCCGTT
TCAGGGACAG CCACTCAAAC CACAGGAATA ACCGCGACTG ACGCCGTAGC CCGCGTATTC
CCCGCCGCCA GTCTGGCACT ACTCACCACT GTCATCGCCT ATCTGGCCAT AGGCTTAACG
CCATTCCCCG GTATGCAGCA GGTGGCCGTG TTCTGCGCCG CGGGACTCCT TGGCGCCTAT
CTGACACTGA TCTTCGCCTA CCCCAAGCTG GCCAATAGCA CCATGAGACC CGGCGATCGC
GCGCTCGGTT TGGCGACGCG TTACCTCAAT GCCATGCAGA CCATAGCGCG GCCCATTAAT
GGGGCCAAAG GAATAGCAAT TGCCCTCGGT CTGCTACTCG TGGCTATATT TGGCCTGAAT
AGACTCGGGG TGAACGATGA TATTCGCGCT CTGCAACAGA GTCCTCTGAG CGTCACCCAA
GGCGAGCAGC GACTGCGCCA GGTAATGAGC GGCGGCACAG ATAACCAATT TATCCTGGTA
CGGGCAGAGA CCGCCGAGGC GCTGCTGACA AGGCTGGAGG CACTGTCGCC GACGCTCGGC
TCACTGCAAC ACCAGGGCGT GCTAGGTAAC TCGGTTAATC TGGCCCACTA CCTGCCCAGT
CAGGCAAGCC AGCAAGAGGC CTATCGCCTA CAAGGGCAGA TCTACCACAA GCTGCCTGAG
GTGTTAGCGC ATCTAGGATT AGATGGCGAC TTGGCACCCT CCCTGATGGC GAGCTTCGAG
GCCAGCGCCA ATGAGACCAT CACCCCAGAT AAATTCTTCG CCTCCCGTGC CGGTGAACTG
TTCGCGCCCC TATGGCTGGC GCCCGATGGG ACTGATGCTC AAGCTCAAAT GCAAGCACAA
ACTCAAGCTC AAGCTAAAAC ACAGCCAAGC GATAAAACCT CTGGCAGTGA CGGCGCCACA
TACGGCGCAA TTGTCCTGCT AGGCGGCATC ACAGATCTTG ACGACTTAAC CCAGGCAATC
AGCCCATTAA GTGGCGTAAC CTTGGTGGAT AAGGTGCAGG ATATCTCGGA TGTGATGGCC
AAGTATCGCA GCCTAACCCT GAGCCTGCTG GGCCTGGCGC TCGTCGTCGC TGGGCTTATC
TTCTCGCTGC GCTTCGGCCT CAAGATGGCG CTGTGGATCA CGGCCGTGCC CGCCCTGGCG
GCGCTGCTCA CCTTGGCAGG CCTGGGATTA GCCGGCTCAC CACTCACCTT GTTTCATGCA
CTGGCGCTGA TCTTGGTCTT TGGCATAGGC GTCGACTACA GTCTGTTTTT CGCCGAGAGC
CATAGAGGCG AAGGCGTGAT GATGGCGGTA TTCATGTCCG CCTGCTCGAC CCTGATGGCC
TTCGGTCTGC TGGCCTTCAG CCAGACGCCG GCCATCCACT ATTTCGGCCT GACATTACTC
CTGGGGATAG GCCTGACCTT CGTGCTTTCC CCCTTTATTC ACACATTAAC AAGGATTGAT
AAGTGA
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| Protein sequence | MILRLSDRLS RLSANTRLVI WLVLLAAMAL LAAQALSRGA GVQSDILAML PKIQEDPLTQ
RAIDRVEQQL ANRIYLGVVS PDQATAIKGA KQLLSALQGA PEAFTQVQSA DMQGAQALNR
FYFPYRFHLL TTQQKALLAT GQLAKLEANT LAQLYNAFGY ANSQLLSQDP LLLYPELLKQ
LSPQRRLKVV DGILVGQELA QEARSNKDTQ GNSVAIVMAQ GVGSAFNPKA QELQLARLEE
AISQMQQSLE PKQEVTVIKG GALFHAAAAT TQAKREVSSL GLASLIGVIL LVWLAFRSMM
PLTIAALTIA TSLLFALSAT LWIFTQVHLL TLVFGTSLIG IAIDYSFHFY CERLQSQKAV
SGTATQTTGI TATDAVARVF PAASLALLTT VIAYLAIGLT PFPGMQQVAV FCAAGLLGAY
LTLIFAYPKL ANSTMRPGDR ALGLATRYLN AMQTIARPIN GAKGIAIALG LLLVAIFGLN
RLGVNDDIRA LQQSPLSVTQ GEQRLRQVMS GGTDNQFILV RAETAEALLT RLEALSPTLG
SLQHQGVLGN SVNLAHYLPS QASQQEAYRL QGQIYHKLPE VLAHLGLDGD LAPSLMASFE
ASANETITPD KFFASRAGEL FAPLWLAPDG TDAQAQMQAQ TQAQAKTQPS DKTSGSDGAT
YGAIVLLGGI TDLDDLTQAI SPLSGVTLVD KVQDISDVMA KYRSLTLSLL GLALVVAGLI
FSLRFGLKMA LWITAVPALA ALLTLAGLGL AGSPLTLFHA LALILVFGIG VDYSLFFAES
HRGEGVMMAV FMSACSTLMA FGLLAFSQTP AIHYFGLTLL LGIGLTFVLS PFIHTLTRID
K
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