| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Shew_3519 |
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| Symbol | |
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| ID | 4922971 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella loihica PV-4 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_009092 |
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| Strand | + |
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| Start bp | 4205153 |
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| End bp | 4205926 |
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| Gene Length | 774 bp |
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| Protein Length | 257 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 640165141 |
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| Product | outer membrane lipoprotein carrier protein LolA |
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| Protein accession | YP_001095644 |
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| Protein GI | 127514447 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 25 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 16 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATGACCC CCTGGTTTCA CCGCATCACT TGGCTTCACC GCATCACTTG CCTTCACCGC
ACCGCTAAGG CCGGCCTGTT TTGCCTGCTG TTTTGTCCTA TGTTCTGCCT GAGTCTCGTT
AGTTTCGTAA CTCTCGCAGA ACAATCAACC GACTATGAGG CACTTTTTAA AGCGCCAGCA
GACAATGCAG CCCTATCCAA GCTGGTGACC CGTCTGGGCG GCGGTGAGTC GGCAAGGGGC
GCGTTTACCC AGTCCCGCTA CCTCAAGGTG CTGAAGAAGC CGCTGGTGAG CCGCGGCGAG
TTCCTGTTTC AGGACAAGCT GGGGATCGCC TGGCTACAGA CAGCGCCCTT TCCCTCTGGC
CTGGTGCTGA CGCAAAACAC CCTAGTGCAG ATAGATGCCG ACGGCAACCG CCAGATAAGC
CACGCCGATG ATAATCCACA GGCCGGCGCC ATGGCGCAGA TGATGCCCAA GCTGATGAGC
GCGCTACTAG GCGGCGATCT CGCCCCCCTG GAGGCGCAAT TTACCCTGCA TCTGCAGCAG
CAAGCAGAGT GCTGGCAGTT GGGCCTGGAG CCGATAGACC CCCTCATCAA GCAGGCAATG
CCACGCATAG TGCTACAGGG AAGCGAGCAA CTCGAGTCTC TCAGCCTGCT GGATAACCGC
GGCGATCTCA GCGTGATCGA ATTTAACGCC CTGGCGCAGC GTCCGTTGAC GGCGGATGAG
CAGGCCTATT TCAAACTCGA CGCCGACCCT CGCCCCGCGA CAGAGGCGAG ATGA
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| Protein sequence | MMTPWFHRIT WLHRITCLHR TAKAGLFCLL FCPMFCLSLV SFVTLAEQST DYEALFKAPA
DNAALSKLVT RLGGGESARG AFTQSRYLKV LKKPLVSRGE FLFQDKLGIA WLQTAPFPSG
LVLTQNTLVQ IDADGNRQIS HADDNPQAGA MAQMMPKLMS ALLGGDLAPL EAQFTLHLQQ
QAECWQLGLE PIDPLIKQAM PRIVLQGSEQ LESLSLLDNR GDLSVIEFNA LAQRPLTADE
QAYFKLDADP RPATEAR
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